RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 SELENBP1Q13228 472 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 DNASE1L3Q13609 305 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 INAVAQ3KP66 663 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 DSG4Q86SJ6 1040 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 ZNF296Q8WUU4 475 aaPredicted RBP12.88□□□□□ -0.35
MSH5-204ENST00000375755 NPY6RQ99463 290 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 MEAF6Q9HAF1 191 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 FBRSL1Q9HCM7 1045 aaKnown RBP12.88□□□□□ -0.35
MSH5-204ENST00000375755 STARD7Q9NQZ5 370 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 ERVK-11Q9UQG0 969 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 PRG3Q9Y2Y8 225 aaPredicted RBP12.88□□□□□ -0.35
MSH5-204ENST00000375755 NLRC5Q86WI3 1866 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 DYTNA2CJ06 578 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 C7P10643 843 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 TCEA1P23193 301 aaKnown RBP12.88□□□□□ -0.35
MSH5-204ENST00000375755 NMBRP28336 390 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 PBX3P40426 434 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 GLUD2P49448 558 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 PCYT1AP49585 367 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 GPNMBQ14956 572 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 UTS2BQ765I0 119 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 CEP97Q8IW35 865 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 PNPT1Q8TCS8 783 aaKnown RBP12.88□□□□□ -0.35
MSH5-204ENST00000375755 DHRS1Q96LJ7 313 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 BEGAINQ9BUH8 593 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 HACD3Q9P035 362 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 VWA7Q9Y334 891 aa12.88□□□□□ -0.35
MSH5-204ENST00000375755 MTF2Q9Y483 593 aaPredicted RBP12.88□□□□□ -0.35
MSH5-204ENST00000375755 FAM47E-STBD1D6RA91 191 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 DAB1O75553 588 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 MYO1DO94832 1006 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 NAT1P18440 290 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 PLA2G16P53816 162 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 ATP6V0D1P61421 351 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 TUSC3Q13454 348 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 FRG1Q14331 258 aaKnown RBP12.87□□□□□ -0.35
MSH5-204ENST00000375755 FAM26DQ5JW98 314 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 TMEM86AQ8N2M4 240 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 TRPV3Q8NET8 790 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 KCTD13Q8WZ19 329 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 TRIM8Q9BZR9 551 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 RHOJQ9H4E5 214 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 CASS4Q9NQ75 786 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 MAP10Q9P2G4 905 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 CDH9Q9ULB4 789 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 ACOT9Q9Y305 439 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 PTCH2Q9Y6C5 1203 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 SCN5AQ14524 2016 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 H0Y858 1186 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 BCAS1O75363 584 aaPredicted RBP12.87□□□□□ -0.35
MSH5-204ENST00000375755 AP2A1O95782 977 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 MT-ND1P03886 318 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 ODC1P11926 461 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 TGM1P22735 817 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 RPL9P32969 192 aaKnown RBP12.87□□□□□ -0.35
MSH5-204ENST00000375755 SHMT2P34897 504 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 ARL4AP40617 200 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 ARCN1P48444 511 aaKnown RBP12.87□□□□□ -0.35
MSH5-204ENST00000375755 GPR15P49685 360 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 SNX16P57768 344 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 LCN8Q6JVE9 175 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 TBPL2Q6SJ96 375 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 PIWIL4Q7Z3Z4 852 aaKnown RBP12.87□□□□□ -0.35
MSH5-204ENST00000375755 PSTKQ8IV42 348 aaKnown RBP12.87□□□□□ -0.35
MSH5-204ENST00000375755 MFSD6LQ8IWD5 586 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 SFRP1Q8N474 314 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 NT5C3BQ969T7 300 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 MUS81Q96NY9 551 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 TRIM15Q9C019 465 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 CYP4F12Q9HCS2 524 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 PCDH12Q9NPG4 1184 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 AKIP1Q9NQ31 210 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 TLR9Q9NR96 1032 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 KLHL8Q9P2G9 620 aaPredicted RBP12.87□□□□□ -0.35
MSH5-204ENST00000375755 PTPRDP23468 1912 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 ATP6AP2A0A1C7CYW4 349 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 TOR1BO14657 336 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 ATP6AP2O75787 350 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 RSL1D1O76021 490 aaKnown RBP12.87□□□□□ -0.35
MSH5-204ENST00000375755 NOS2P35228 1153 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 HADHAP40939 763 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 TPTEP56180 551 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 TUBA3CQ13748 450 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 CAPRIN1Q14444 709 aaKnown RBP12.87□□□□□ -0.35
MSH5-204ENST00000375755 INTS6LQ5JSJ4 861 aaKnown RBP12.87□□□□□ -0.35
MSH5-204ENST00000375755 BROXQ5VW32 411 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 OVOS1Q6IE37 1185 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 STRADAQ7RTN6 431 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 ANKRD13BQ86YJ7 626 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 REM2Q8IYK8 340 aaPredicted RBP12.87□□□□□ -0.35
MSH5-204ENST00000375755 GPR152Q8TDT2 470 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 FKBP10Q96AY3 582 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 CLIP3Q96DZ5 547 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 SLC2A13Q96QE2 648 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 PKMYT1Q99640 499 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 WDR6Q9NNW5 1121 aaKnown RBP12.87□□□□□ -0.35
MSH5-204ENST00000375755 RGS18Q9NS28 235 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 CMTM6Q9NX76 183 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 KLHL3Q9UH77 587 aa12.87□□□□□ -0.35
MSH5-204ENST00000375755 ARPC2O15144 300 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms