RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 NUDT2P50583 147 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 STC1P52823 247 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 MRPS22P82650 360 aaKnown RBP13.92□□□□□ -0.18
MSH5-202ENST00000375740 IKBKEQ14164 716 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 CHST9Q7L1S5 443 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 TMCO2Q7Z6W1 182 aaPredicted RBP13.92□□□□□ -0.18
MSH5-202ENST00000375740 AHI1Q8N157 1196 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 CYP2S1Q96SQ9 504 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 MUC3BQ9H195 1237 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 GSTO2Q9H4Y5 243 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 COPS7BQ9H9Q2 264 aaPredicted RBP13.92□□□□□ -0.18
MSH5-202ENST00000375740 FAF1Q9UNN5 650 aaPredicted RBP13.92□□□□□ -0.18
MSH5-202ENST00000375740 COPG1Q9Y678 874 aaKnown RBP13.92□□□□□ -0.18
MSH5-202ENST00000375740 TMX2-CTNND1H3BSU7 103 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 SLC22A2O15244 555 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 F11P03951 625 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 SOD2P04179 222 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 TSPAN8P19075 237 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 OGNP20774 298 aaKnown RBP13.92□□□□□ -0.18
MSH5-202ENST00000375740 ADSLP30566 484 aaPredicted RBP13.92□□□□□ -0.18
MSH5-202ENST00000375740 ZNF140P52738 457 aaPredicted RBP13.92□□□□□ -0.18
MSH5-202ENST00000375740 TLE2Q04725 743 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 CXorf57Q6NSI4 855 aaKnown RBP13.92□□□□□ -0.18
MSH5-202ENST00000375740 LINGO4Q6UY18 593 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 SLC39A5Q6ZMH5 540 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 GLT6D1Q7Z4J2 308 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 KYQ8NBH2 561 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 PPP1R14BQ96C90 147 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 AARSD1Q9BTE6 412 aaKnown RBP13.92□□□□□ -0.18
MSH5-202ENST00000375740 ZBED2Q9BTP6 218 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 TDRD1Q9BXT4 1180 aaKnown RBP13.92□□□□□ -0.18
MSH5-202ENST00000375740 PSMD13Q9UNM6 376 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 TANC1Q9C0D5 1861 aa13.92□□□□□ -0.18
MSH5-202ENST00000375740 UBFD1O14562 309 aaKnown RBP13.91□□□□□ -0.18
MSH5-202ENST00000375740 SUPT7LO94864 414 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 ARSAP15289 507 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 RPL26P61254 145 aaKnown RBP13.91□□□□□ -0.18
MSH5-202ENST00000375740 ARF5P84085 180 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 GSTM4Q03013 218 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 C16orf72Q14CZ0 275 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 TAF1AQ15573 450 aaPredicted RBP13.91□□□□□ -0.18
MSH5-202ENST00000375740 FAM219BQ5XKK7 198 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 TPGS2Q68CL5 300 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 ANKRD33Q7Z3H0 272 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 DNAJB7Q7Z6W7 309 aaPredicted RBP13.91□□□□□ -0.18
MSH5-202ENST00000375740 LPCAT1Q8NF37 534 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 EXT2Q93063 718 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 ZBTB26Q9HCK0 441 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 OGDHLQ9ULD0 1010 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 ARIH1Q9Y4X5 557 aaPredicted RBP13.91□□□□□ -0.18
MSH5-202ENST00000375740 RAI2Q9Y5P3 530 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 UBA6A0AVT1 1052 aaPredicted RBP13.91□□□□□ -0.18
MSH5-202ENST00000375740 SNAP91O60641 907 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 PARNO95453 639 aaKnown RBP13.91□□□□□ -0.18
MSH5-202ENST00000375740 CD160O95971 181 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 FAM58BPP0C7Q3 252 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 FMO4P31512 558 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 SUOXP51687 545 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 NR1H2P55055 460 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 MTTPP55157 894 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 C1QTNF8P60827 252 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 TWF1Q12792 350 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 TYSND1Q2T9J0 566 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 UNC50Q53HI1 259 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 ZNF678Q5SXM1 525 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 FAM117BQ6P1L5 589 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 DSELQ8IZU8 1212 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 RNF148Q8N7C7 305 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 GIPC3Q8TF64 312 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 RCN3Q96D15 328 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 TRMT2BQ96GJ1 504 aaKnown RBP13.91□□□□□ -0.18
MSH5-202ENST00000375740 FAR2Q96K12 515 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 RNF208Q9H0X6 261 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 POLR3BQ9NW08 1133 aaPredicted RBP13.91□□□□□ -0.18
MSH5-202ENST00000375740 RSL24D1Q9UHA3 163 aaKnown RBP13.91□□□□□ -0.18
MSH5-202ENST00000375740 TRAF6Q9Y4K3 522 aa13.91□□□□□ -0.18
MSH5-202ENST00000375740 MBL2P11226 248 aaPredicted RBP13.9□□□□□ -0.18
MSH5-202ENST00000375740 PORP16435 677 aaPredicted RBP13.9□□□□□ -0.18
MSH5-202ENST00000375740 ZNF37AP17032 561 aaPredicted RBP13.9□□□□□ -0.18
MSH5-202ENST00000375740 HOXB8P17481 243 aaPredicted RBP13.9□□□□□ -0.18
MSH5-202ENST00000375740 CDKN1CP49918 316 aaPredicted RBP13.9□□□□□ -0.18
MSH5-202ENST00000375740 ILF2Q12905 390 aaKnown RBP13.9□□□□□ -0.18
MSH5-202ENST00000375740 PDAP1Q13442 181 aaKnown RBP13.9□□□□□ -0.18
MSH5-202ENST00000375740 VEPH1Q14D04 833 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 PTPRRQ15256 657 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 TRIM60Q495X7 471 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 AUTS2Q8WXX7 1259 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 L3HYPDHQ96EM0 354 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 SLC22A12Q96S37 553 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 CORO1BQ9BR76 489 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 POPDC3Q9HBV1 291 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 INTS10Q9NVR2 710 aaKnown RBP13.9□□□□□ -0.18
MSH5-202ENST00000375740 RAB26Q9ULW5 256 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 ANAPC1Q9H1A4 1944 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 KANSL1LA0AUZ9 987 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 SH3PXD2BA1X283 911 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 C2orf81A6NN90 581 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 H3BMM5 538 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 PRRG1O14668 218 aa13.9□□□□□ -0.18
MSH5-202ENST00000375740 TBL1XO60907 577 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms