RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 UBXN8O00124 270 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 ABCB7O75027 752 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 ALDH2P05091 517 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 MMP3P08254 477 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 SHMT2P34897 504 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 SOX11P35716 441 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 HALP42357 657 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 DIO3P55073 304 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 OXCT1P55809 520 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 FUT11Q495W5 492 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 PYCR3Q53H96 274 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 PAGE3Q5JUK9 113 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 XAF1Q6GPH4 301 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 OR6P1Q8NGX9 317 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 VPS33AQ96AX1 596 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 BIRC7Q96CA5 298 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 PPP1R10Q96QC0 940 aaKnown RBP21.05■□□□□ 0.96
UPF3A-202ENST00000375299 ATP13A1Q9HD20 1204 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 IPPQ9Y573 584 aa21.05■□□□□ 0.96
UPF3A-202ENST00000375299 TRIM43BA6NCK2 446 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 RRN3P2A6NIE6 340 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 VPS4BO75351 444 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 SLC4A1P02730 911 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 FDXRP22570 491 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 RCAN2Q14206 197 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 CBX2Q14781 532 aaPredicted RBP21.04■□□□□ 0.96
UPF3A-202ENST00000375299 ZIK1Q3SY52 487 aaPredicted RBP21.04■□□□□ 0.96
UPF3A-202ENST00000375299 BPIFB6Q8NFQ5 453 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 BPIFB1Q8TDL5 484 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 SMARCD1Q96GM5 515 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 CHID1Q9BWS9 393 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 LHPPQ9H008 270 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 SLC25A51Q9H1U9 297 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 MARCH4Q9P2E8 410 aaPredicted RBP21.04■□□□□ 0.96
UPF3A-202ENST00000375299 MRPL42Q9Y6G3 142 aaKnown RBP21.04■□□□□ 0.96
UPF3A-202ENST00000375299 V9GYQ6 96 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 TYW5A2RUC4 315 aaKnown RBP21.04■□□□□ 0.96
UPF3A-202ENST00000375299 CCL22O00626 93 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 EEDO75530 441 aaKnown RBP21.04■□□□□ 0.96
UPF3A-202ENST00000375299 SMPD1P17405 629 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 FUT4P22083 530 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 HRH2P25021 359 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 MLLT10P55197 1068 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 ITGADQ13349 1161 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 PFKFB4Q16877 469 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 OTUD3Q5T2D3 398 aaPredicted RBP21.04■□□□□ 0.96
UPF3A-202ENST00000375299 IGFN1Q86VF2 1251 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 PROSER1Q86XN7 944 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 TMEM40Q8WWA1 233 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 SLC35B4Q969S0 331 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 ABHD8Q96I13 439 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 ING2Q9H160 280 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 CRYL1Q9Y2S2 319 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 PLXNB2O15031 1838 aa21.04■□□□□ 0.96
UPF3A-202ENST00000375299 SYNCRIPO60506 623 aaKnown RBP21.03■□□□□ 0.96
UPF3A-202ENST00000375299 HOXD8P13378 290 aaPredicted RBP21.03■□□□□ 0.96
UPF3A-202ENST00000375299 HTR1EP28566 365 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 ZFP36L2P47974 494 aaKnown RBP21.03■□□□□ 0.96
UPF3A-202ENST00000375299 LHX1P48742 406 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 ALDH3A2P51648 485 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 ARSDP51689 593 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 OR4D1Q15615 310 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 MANEALQ5VSG8 457 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 SPATA19Q7Z5L4 167 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 RNF145Q96MT1 663 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 TMEM74Q96NL1 305 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 CSF3RQ99062 836 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 BEGAINQ9BUH8 593 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 USP22Q9UPT9 525 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 PCDHGA11Q9Y5H2 935 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 TIMM13Q9Y5L4 95 aaPredicted RBP21.03■□□□□ 0.96
UPF3A-202ENST00000375299 PTGESO14684 152 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 PAGE1O75459 146 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 IGLV3-25P01717 112 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 MTHFD2P13995 350 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 HTR7P34969 479 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 ARSFP54793 590 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 BFSP2Q13515 415 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 CYP2A13Q16696 494 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 GTF2IRD2BQ6EKJ0 949 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 TMEM214Q6NUQ4 689 aaKnown RBP21.03■□□□□ 0.96
UPF3A-202ENST00000375299 GTF2IRD2Q86UP8 949 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 KIAA2013Q8IYS2 634 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 MAGED4Q96JG8 741 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 TEX37Q96LM6 180 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 RAD21L1Q9H4I0 556 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 AIG1Q9NVV5 245 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 CACNG4Q9UBN1 327 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 LEF1Q9UJU2 399 aaPredicted RBP21.03■□□□□ 0.96
UPF3A-202ENST00000375299 PCNTO95613 3336 aa21.03■□□□□ 0.96
UPF3A-202ENST00000375299 OR51F1A6NGY5 319 aa21.02■□□□□ 0.96
UPF3A-202ENST00000375299 KPNA6O60684 536 aa21.02■□□□□ 0.96
UPF3A-202ENST00000375299 RXRGP48443 463 aa21.02■□□□□ 0.96
UPF3A-202ENST00000375299 MRPL19P49406 292 aaKnown RBP21.02■□□□□ 0.96
UPF3A-202ENST00000375299 DAG1Q14118 895 aa21.02■□□□□ 0.96
UPF3A-202ENST00000375299 RBM48Q5RL73 367 aaKnown RBP21.02■□□□□ 0.96
UPF3A-202ENST00000375299 ITIH5Q86UX2 942 aa21.02■□□□□ 0.96
UPF3A-202ENST00000375299 RIMKLAQ8IXN7 391 aa21.02■□□□□ 0.96
UPF3A-202ENST00000375299 ZC3H15Q8WU90 426 aaKnown RBP21.02■□□□□ 0.96
UPF3A-202ENST00000375299 PPP1R13LQ8WUF5 828 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms