RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 HCN1O60741 890 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 CCNDBP1O95273 360 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 GLP2RO95838 553 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 INHAP05111 366 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 SERPINF1P36955 418 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 RAB8AP61006 207 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 NKX6-1P78426 367 aaPredicted RBP6.59□□□□□ -1.35
UBR4-204ENST00000375254 ATP13A4Q4VNC1 1196 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 MOB1BQ7L9L4 216 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 FAM220AQ7Z4H9 259 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 GPSM1Q86YR5 675 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 OR5T3Q8NGG3 340 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 SAGP10523 405 aaPredicted RBP6.59□□□□□ -1.35
UBR4-204ENST00000375254 ELK3P41970 407 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 SLC35F1Q5T1Q4 408 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 RPL13AP3Q6NVV1 102 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 Q6ZNX1 250 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 FBXO33Q7Z6M2 555 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 SYVN1Q86TM6 617 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 LRRC71Q8N4P6 559 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 ZNF548Q8NEK5 533 aaPredicted RBP6.59□□□□□ -1.35
UBR4-204ENST00000375254 SGCDQ92629 289 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 LENG8Q96PV6 779 aaPredicted RBP6.59□□□□□ -1.35
UBR4-204ENST00000375254 NT5C1AQ9BXI3 368 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 ADGRE3Q9BY15 652 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 AGXT2Q9BYV1 514 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 PCDHA6Q9UN73 950 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 RNF6Q9Y252 685 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 PCDHGB2Q9Y5G2 931 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 PCDHA8Q9Y5H6 950 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 ERVV-2B6SEH9 535 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 POLRMTO00411 1230 aaKnown RBP6.59□□□□□ -1.35
UBR4-204ENST00000375254 RAD17O75943 681 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 NDST3O95803 873 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 PTPN2P17706 415 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 HDCP19113 662 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 ATXN1P54253 815 aaKnown RBP6.59□□□□□ -1.35
UBR4-204ENST00000375254 PTP4A2Q12974 167 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 KLHL26Q53HC5 615 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 PAQR7Q86WK9 346 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 SLC5A5Q92911 643 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 GLTPQ9NZD2 209 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 UHRF1BP1LA0JNW5 1464 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 ELOVL7A1L3X0 281 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 ADAMTS2O95450 1211 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 RAP2AP10114 183 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 CES1P23141 567 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 ETFBP38117 255 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 TSPAN5P62079 268 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 PPP3R1P63098 170 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 TGFBIQ15582 683 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 DHRS9Q9BPW9 319 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 MTMR4Q9NYA4 1195 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 TUBAL3A6NHL2 446 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 IL3P08700 152 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 ETFAP13804 333 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 CDH17Q12864 832 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 METTL2AQ96IZ6 378 aaKnown RBP6.59□□□□□ -1.35
UBR4-204ENST00000375254 UCK2Q9BZX2 261 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 K7EPI3 171 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 MAPK10P53779 464 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 SPESP1Q6UW49 350 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 USP49Q70CQ1 688 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 NKAPQ8N5F7 415 aaKnown RBP6.59□□□□□ -1.35
UBR4-204ENST00000375254 PRELID2Q8N945 189 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 SLC38A4Q969I6 547 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 NXF3Q9H4D5 531 aaKnown RBP6.59□□□□□ -1.35
UBR4-204ENST00000375254 DNAJC18Q9H819 358 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 TAS2R8Q9NYW2 309 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 DCLK1O15075 740 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 PRODHO43272 600 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 OAZ2O95190 189 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 KCNA5P22460 613 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 GSTM2P28161 218 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 EEFSECP57772 596 aaKnown RBP6.59□□□□□ -1.35
UBR4-204ENST00000375254 ZNF529Q6P280 563 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 CARM1Q86X55 608 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 SLC35F3Q8IY50 421 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 DPYSL5Q9BPU6 564 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 BANF1O75531 89 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 MAGP20916 626 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 CFL1P23528 166 aaKnown RBP6.59□□□□□ -1.35
UBR4-204ENST00000375254 AGAP7PQ5VUJ5 663 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 SLC22A25Q6T423 547 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 RPTNQ6XPR3 784 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 ZNF438Q7Z4V0 828 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 ACTL9Q8TC94 416 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 SH3YL1Q96HL8 342 aaPredicted RBP6.59□□□□□ -1.35
UBR4-204ENST00000375254 SLC45A3Q96JT2 553 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 ZNF578Q96N58 590 aaPredicted RBP6.59□□□□□ -1.35
UBR4-204ENST00000375254 SLC52A2Q9HAB3 445 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 A0A1B0GVM2 712 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 ZNF705EA8MWA4 302 aaPredicted RBP6.59□□□□□ -1.35
UBR4-204ENST00000375254 ZNF821O75541 412 aaPredicted RBP6.59□□□□□ -1.35
UBR4-204ENST00000375254 SULT1C4O75897 302 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 DGAT1O75907 488 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 LIMK2P53671 638 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 KLRC3Q07444 240 aa6.59□□□□□ -1.35
UBR4-204ENST00000375254 CRTC2Q53ET0 693 aaPredicted RBP6.59□□□□□ -1.35
UBR4-204ENST00000375254 SMYD5Q6GMV2 418 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms