RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 PPP1R21Q6ZMI0 780 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 CENPUQ71F23 418 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 ZNF410Q86VK4 478 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 VSIG1Q86XK7 387 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 FAM90A1Q86YD7 464 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 CCDC13Q8IYE1 715 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 LRRC34Q8IZ02 419 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 ARFGAP1Q8N6T3 406 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 B3GALNT2Q8NCR0 500 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 GPRC5AQ8NFJ5 357 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 CMASQ8NFW8 434 aaPredicted RBP4.91□□□□□ -1.62
USP48-202ENST00000374730 ACTL9Q8TC94 416 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 CKAP2Q8WWK9 683 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 CCT6BQ92526 530 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 MAML1Q92585 1016 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 PRCCQ92733 491 aaPredicted RBP4.91□□□□□ -1.62
USP48-202ENST00000374730 KAT2BQ92831 832 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 C9orf72Q96LT7 481 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 TWNKQ96RR1 684 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 CPXM1Q96SM3 734 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 PRMT1Q99873 361 aaKnown RBP4.91□□□□□ -1.62
USP48-202ENST00000374730 NCAPGQ9BPX3 1015 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 FAM118BQ9BPY3 351 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 CNPPD1Q9BV87 410 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 SMYD3Q9H7B4 428 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 SAYSD1Q9NPB0 183 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 PDGFCQ9NRA1 345 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 ASB6Q9NWX5 421 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 MORF4L1Q9UBU8 362 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 HMGXB4Q9UGU5 601 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 TAGLN3Q9UI15 199 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 SLC24A2Q9UI40 661 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 CYTH4Q9UIA0 394 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 ZDHHC8Q9ULC8 765 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 BARX2Q9UMQ3 279 aaPredicted RBP4.91□□□□□ -1.62
USP48-202ENST00000374730 ZNF148Q9UQR1 794 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 DERAQ9Y315 318 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 CAPN7Q9Y6W3 813 aa4.91□□□□□ -1.62
USP48-202ENST00000374730 TRIP12Q14669 1992 aaPredicted RBP4.91□□□□□ -1.62
USP48-202ENST00000374730 TRPM7Q96QT4 1865 aa4.9□□□□□ -1.62
USP48-202ENST00000374730 A0A1B0GUA9 196 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 EXOC1LA0A1B0GW35 172 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 FAM47DPA6NHR8 397 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 C2CD4BA6NLJ0 364 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 CCT8L1PA6NM43 557 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 ZNF487B1APH4 448 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 H0YHG0 523 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 APOC4-APOC2K7ER74 178 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 M0QYV0 167 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 SGK1O00141 431 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 MCF2LO15068 1137 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 STRNO43815 780 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 SNX3O60493 162 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 CST8O60676 142 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 RNF8O76064 485 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 SNUPNO95149 360 aaKnown RBP4.9□□□□□ -1.63
USP48-202ENST00000374730 TRUB2O95900 331 aaKnown RBP4.9□□□□□ -1.63
USP48-202ENST00000374730 APOC2P02655 101 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 KRT19P08727 400 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 RARBP10826 455 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 CETPP11597 493 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 CDK4P11802 303 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 BRAFP15056 766 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 GPD1P21695 349 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 IL1R2P27930 398 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 GCAP28676 217 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 ADORA2AP29274 412 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 MIPP30301 263 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 PHBP35232 272 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 GCLCP48506 637 aaPredicted RBP4.9□□□□□ -1.63
USP48-202ENST00000374730 NDUFV1P49821 464 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 ZNF135P52742 658 aaPredicted RBP4.9□□□□□ -1.63
USP48-202ENST00000374730 HK3P52790 923 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 CDH8P55286 799 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 OSTNP61366 133 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 OTUD4Q01804 1114 aaKnown RBP4.9□□□□□ -1.63
USP48-202ENST00000374730 MYO1EQ12965 1108 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 GPS1Q13098 491 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 XRCC4Q13426 336 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 TFDP2Q14188 446 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 HABP2Q14520 560 aaPredicted RBP4.9□□□□□ -1.63
USP48-202ENST00000374730 CCDC38Q502W7 563 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 TMEM63BQ5T3F8 832 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 WDR78Q5VTH9 848 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 MTHFD1LQ6UB35 978 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 RGS9BPQ6ZS82 235 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 MOB2Q70IA6 237 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 TRABD2AQ86V40 505 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 CDR2LQ86X02 465 aaPredicted RBP4.9□□□□□ -1.63
USP48-202ENST00000374730 SUGP1Q8IWZ8 645 aaKnown RBP4.9□□□□□ -1.63
USP48-202ENST00000374730 KIAA0319LQ8IZA0 1049 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 PRR18Q8N4B5 295 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 CPA6Q8N4T0 437 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 LRRC52Q8N7C0 313 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 NAT8LQ8N9F0 302 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 GLIS1Q8NBF1 620 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 TEKT4Q8WW24 435 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 DYDC1Q8WWB3 177 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 CPT1BQ92523 772 aa4.9□□□□□ -1.63
USP48-202ENST00000374730 RGMAQ96B86 450 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms