RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 ZNF778Q96MU6 729 aa14.91□□□□□ -0.02
HSPG2-201ENST00000374673 ELF4Q99607 663 aaPredicted RBP14.91□□□□□ -0.02
HSPG2-201ENST00000374673 EDEM2Q9BV94 578 aa14.91□□□□□ -0.02
HSPG2-201ENST00000374673 TREX1Q9NSU2 369 aa14.91□□□□□ -0.02
HSPG2-201ENST00000374673 SMOXQ9NWM0 555 aa14.91□□□□□ -0.02
HSPG2-201ENST00000374673 FNDC3AQ9Y2H6 1198 aaKnown RBP14.91□□□□□ -0.02
HSPG2-201ENST00000374673 FAM237BA0A1B0GVD1 139 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 MAGEB16A2A368 324 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 CCDC78A2IDD5 438 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 TMEM202A6NGA9 273 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 CCL22O00626 93 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 TNFRSF10CO14798 259 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 INPP4BO15327 924 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 MC4RP32245 332 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 PLA2G5P39877 138 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 RXRGP48443 463 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 ARSDP51689 593 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 ATXN3P54252 364 aaPredicted RBP14.9□□□□□ -0.02
HSPG2-201ENST00000374673 CAV1Q03135 178 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 DHX9Q08211 1270 aaKnown RBP14.9□□□□□ -0.02
HSPG2-201ENST00000374673 EIF2B5Q13144 721 aaKnown RBP14.9□□□□□ -0.02
HSPG2-201ENST00000374673 HLA-BQ31612 363 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 DNAJC21Q5F1R6 531 aaKnown RBP14.9□□□□□ -0.02
HSPG2-201ENST00000374673 FNBP1LQ5T0N5 605 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 ENPP7Q6UWV6 458 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 SNX20Q7Z614 316 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 PHYKPLQ8IUZ5 450 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 PDIK1LQ8N165 341 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 MINDY1Q8N5J2 469 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 OR56A4Q8NGH8 313 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 ZNF398Q8TD17 642 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 ART4Q93070 314 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 FAM122AQ96E09 287 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 TBATAQ96M53 351 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 GAREM1Q9H706 876 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 ASB8Q9H765 288 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 SAMD15Q9P1V8 674 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 SLC2A6Q9UGQ3 507 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 DMGDHQ9UI17 866 aaKnown RBP14.9□□□□□ -0.02
HSPG2-201ENST00000374673 TMPRSS11EQ9UL52 423 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 SLC17A4Q9Y2C5 497 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.9□□□□□ -0.02
HSPG2-201ENST00000374673 SLC30A1Q9Y6M5 507 aa14.9□□□□□ -0.02
HSPG2-201ENST00000374673 A0A1B0GTQ1 180 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 E7ESA3 106 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 CDX4O14627 284 aaPredicted RBP14.89□□□□□ -0.03
HSPG2-201ENST00000374673 YKT6O15498 198 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 SLC25A14O95258 325 aaPredicted RBP14.89□□□□□ -0.03
HSPG2-201ENST00000374673 CSF2P04141 144 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 NME1P15531 152 aaKnown RBP14.89□□□□□ -0.03
HSPG2-201ENST00000374673 ITGALP20701 1170 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 NMBRP28336 390 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 ARL4CP56559 192 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 NFATC2Q13469 925 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 HIF1AQ16665 826 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 GPR33Q49SQ1 333 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 AASDHQ4L235 1098 aaPredicted RBP14.89□□□□□ -0.03
HSPG2-201ENST00000374673 MSS51Q4VC12 460 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 CASC4Q6P4E1 433 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 TMEM135Q86UB9 458 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 DDHD1Q8NEL9 900 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 LRRC39Q96DD0 335 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 MFSD3Q96ES6 412 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 SGSM3Q96HU1 749 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 GTPBP2Q9BX10 602 aaKnown RBP14.89□□□□□ -0.03
HSPG2-201ENST00000374673 SUDS3Q9H7L9 328 aaPredicted RBP14.89□□□□□ -0.03
HSPG2-201ENST00000374673 FGF22Q9HCT0 170 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 RXFP3Q9NSD7 469 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 DNAAF2Q9NVR5 837 aaKnown RBP14.89□□□□□ -0.03
HSPG2-201ENST00000374673 VPS18Q9P253 973 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 KLQ9UEF7 1012 aa14.89□□□□□ -0.03
HSPG2-201ENST00000374673 PNMA8BQ9ULN7 279 aaPredicted RBP14.89□□□□□ -0.03
HSPG2-201ENST00000374673 TDRD6O60522 2096 aaKnown RBP14.89□□□□□ -0.03
HSPG2-201ENST00000374673 TRBV5-4A0A0C4DH59 114 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 ESYT3A0FGR9 886 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 PRSS38A1L453 326 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 CCDC162PA2VCL2 907 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 GPR39O43194 453 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 UGT1A9O60656 530 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 USP1O94782 785 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 CEACAM5P06731 702 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 ZNF883P0CG24 379 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 UGT1A6P19224 532 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 UGT1A1P22309 533 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 UGT1A4P22310 534 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 FOXN2P32314 431 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 CA5AP35218 305 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 UGT1A3P35503 534 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 UGT1A5P35504 534 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 ARRB1P49407 418 aaPredicted RBP14.88□□□□□ -0.03
HSPG2-201ENST00000374673 CCT8P50990 548 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 BLKP51451 505 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 SRP54P61011 504 aaKnown RBP14.88□□□□□ -0.03
HSPG2-201ENST00000374673 PRAMEP78395 509 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 GUCY2DQ02846 1103 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 PPARDQ03181 441 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 CACNG1Q06432 222 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 SHBQ15464 509 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 TRADDQ15628 312 aa14.88□□□□□ -0.03
HSPG2-201ENST00000374673 ALG11Q2TAA5 492 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms