RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 PRAMEF11O60813 436 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 STC2O76061 302 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 DNAJB1P25685 340 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 SLC1A2P43004 574 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 YBEYP58557 167 aaPredicted RBP16.85■□□□□ 0.29
PHF1-202ENST00000374516 ESRRGP62508 458 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 TWF1Q12792 350 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 ZBED5Q49AG3 693 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 REP15Q6BDI9 236 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 GPR180Q86V85 440 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 CLVS1Q8IUQ0 354 aaPredicted RBP16.85■□□□□ 0.29
PHF1-202ENST00000374516 ANKFN1Q8N957 763 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 FATE1Q969F0 183 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 PBXIP1Q96AQ6 731 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 ISOC1Q96CN7 298 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 PAWRQ96IZ0 340 aaKnown RBP16.85■□□□□ 0.29
PHF1-202ENST00000374516 NSMCE4AQ9NXX6 385 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 TUBA8Q9NY65 449 aaPredicted RBP16.85■□□□□ 0.29
PHF1-202ENST00000374516 SH3GLB1Q9Y371 365 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 MYLKQ15746 1914 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 COL4A6Q14031 1691 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 PSMD12O00232 456 aaPredicted RBP16.85■□□□□ 0.29
PHF1-202ENST00000374516 SOCS2O14508 198 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 BMP2P12643 396 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 CA8P35219 290 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 GNA12Q03113 381 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 ZNF235Q14590 738 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 MAPRE2Q15555 327 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 LRRC26Q2I0M4 334 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 AGKQ53H12 422 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 SIRPB2Q5JXA9 342 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 CNSTQ6PJW8 725 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 MFSD6LQ8IWD5 586 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 ARNT2Q9HBZ2 717 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 ATP13A1Q9HD20 1204 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 CCDC167Q9P0B6 97 aa16.85■□□□□ 0.29
PHF1-202ENST00000374516 CNOT6Q9ULM6 557 aaKnown RBP16.85■□□□□ 0.29
PHF1-202ENST00000374516 A0A087WXM4 84 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 TRIM64CA6NLI5 447 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 COQ9O75208 318 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 TIPRLO75663 272 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 HNRNPLP14866 589 aaKnown RBP eCLIP16.84■□□□□ 0.29
PHF1-202ENST00000374516 PRAMEP78395 509 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 CTBSQ01459 385 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 PLOD1Q02809 727 aaPredicted RBP16.84■□□□□ 0.29
PHF1-202ENST00000374516 FASTKQ14296 549 aaKnown RBP16.84■□□□□ 0.29
PHF1-202ENST00000374516 C6orf10Q5SRN2 563 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 C16orf59Q7L2K0 433 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 DNAJB7Q7Z6W7 309 aaPredicted RBP16.84■□□□□ 0.29
PHF1-202ENST00000374516 CEP97Q8IW35 865 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 CCDC117Q8IWD4 279 aaPredicted RBP16.84■□□□□ 0.29
PHF1-202ENST00000374516 ADAMTS16Q8TE57 1224 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 C12orf43Q96C57 262 aaKnown RBP16.84■□□□□ 0.29
PHF1-202ENST00000374516 UNKQ9C0B0 810 aaKnown RBP16.84■□□□□ 0.29
PHF1-202ENST00000374516 POLR1EQ9GZS1 481 aaKnown RBP16.84■□□□□ 0.29
PHF1-202ENST00000374516 GTSE1Q9NYZ3 720 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 AGO1Q9UL18 857 aaKnown RBP16.84■□□□□ 0.29
PHF1-202ENST00000374516 KCTD3Q9Y597 815 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 TRIM43BA6NCK2 446 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 H3BNC9 293 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 ZNF701M0R085 212 aaPredicted RBP16.84■□□□□ 0.29
PHF1-202ENST00000374516 PAMP19021 973 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 HOXD9P28356 352 aaPredicted RBP16.84■□□□□ 0.29
PHF1-202ENST00000374516 RAB10P61026 200 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 SQLEQ14534 574 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 KCTD21Q4G0X4 260 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 ZNF789Q5FWF6 425 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 C1orf53Q5VUE5 145 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 TPGS2Q68CL5 300 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 NEPROQ6NW34 567 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 PIWIL4Q7Z3Z4 852 aaKnown RBP16.84■□□□□ 0.29
PHF1-202ENST00000374516 PATL1Q86TB9 770 aaKnown RBP16.84■□□□□ 0.29
PHF1-202ENST00000374516 RNF135Q8IUD6 432 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 CNTN4Q8IWV2 1026 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 PTCD2Q8WV60 388 aaKnown RBP16.84■□□□□ 0.29
PHF1-202ENST00000374516 TRIM43Q96BQ3 446 aaPredicted RBP16.84■□□□□ 0.29
PHF1-202ENST00000374516 EXOC2Q96KP1 924 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 MYRFLQ96LU7 910 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 SLC22A12Q96S37 553 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 PDFQ9HBH1 243 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 MRGBPQ9NV56 204 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 TMEM181Q9P2C4 612 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 PTBP2Q9UKA9 531 aaKnown RBP16.84■□□□□ 0.29
PHF1-202ENST00000374516 FIS1Q9Y3D6 152 aa16.84■□□□□ 0.29
PHF1-202ENST00000374516 ABHD14A-ACY1A0A1B0GW23 586 aa16.83■□□□□ 0.28
PHF1-202ENST00000374516 UBDO15205 165 aa16.83■□□□□ 0.28
PHF1-202ENST00000374516 URODP06132 367 aa16.83■□□□□ 0.28
PHF1-202ENST00000374516 SNRPB2P08579 225 aaKnown RBP16.83■□□□□ 0.28
PHF1-202ENST00000374516 PIRTP0C851 137 aa16.83■□□□□ 0.28
PHF1-202ENST00000374516 ARSAP15289 507 aa16.83■□□□□ 0.28
PHF1-202ENST00000374516 GALNT3Q14435 633 aa16.83■□□□□ 0.28
PHF1-202ENST00000374516 C5orf22Q49AR2 442 aa16.83■□□□□ 0.28
PHF1-202ENST00000374516 SAMD4BQ5PRF9 694 aaKnown RBP16.83■□□□□ 0.28
PHF1-202ENST00000374516 OTOP2Q7RTS6 562 aa16.83■□□□□ 0.28
PHF1-202ENST00000374516 DHFR2Q86XF0 187 aa16.83■□□□□ 0.28
PHF1-202ENST00000374516 ZBTB8BQ8NAP8 495 aaPredicted RBP16.83■□□□□ 0.28
PHF1-202ENST00000374516 TXNDC5Q8NBS9 432 aaKnown RBP16.83■□□□□ 0.28
PHF1-202ENST00000374516 OR13J1Q8NGT2 312 aa16.83■□□□□ 0.28
PHF1-202ENST00000374516 CANT1Q8WVQ1 401 aa16.83■□□□□ 0.28
PHF1-202ENST00000374516 OVCA2Q8WZ82 227 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms