RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 EBF3Q9H4W6 596 aa13.5□□□□□ -0.25
CLIC4-201ENST00000374379 RPL26L1Q9UNX3 145 aaKnown RBP13.5□□□□□ -0.25
CLIC4-201ENST00000374379 C2orf78A6NCI8 922 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 EVPLLA8MZ36 301 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 OR1I1O60431 355 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 HOXB8P17481 243 aaPredicted RBP13.49□□□□□ -0.25
CLIC4-201ENST00000374379 SNRPD1P62314 119 aaKnown RBP13.49□□□□□ -0.25
CLIC4-201ENST00000374379 ABRQ12979 859 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 EPGNQ6UW88 154 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 TAS1R1Q7RTX1 841 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 TRMT11Q7Z4G4 463 aaKnown RBP13.49□□□□□ -0.25
CLIC4-201ENST00000374379 STK32CQ86UX6 486 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 ARHGAP12Q8IWW6 846 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 SLAIN1Q8ND83 568 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 DDX18Q9NVP1 670 aaKnown RBP13.49□□□□□ -0.25
CLIC4-201ENST00000374379 MTF2Q9Y483 593 aaPredicted RBP13.49□□□□□ -0.25
CLIC4-201ENST00000374379 FOCADQ5VW36 1801 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 MATN2O00339 956 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 COCHO43405 550 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 ALDH1A2O94788 518 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 GM2AP17900 193 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 PHEXP78562 749 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 AP5B1Q2VPB7 878 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 COLGALT2Q8IYK4 626 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 MAGEE2Q8TD90 523 aaPredicted RBP13.49□□□□□ -0.25
CLIC4-201ENST00000374379 MZB1Q8WU39 189 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 IL12RB2Q99665 862 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 ATG10Q9H0Y0 220 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 SH3BP4Q9P0V3 963 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 POLR3HQ9Y535 204 aaPredicted RBP13.49□□□□□ -0.25
CLIC4-201ENST00000374379 HMX2A2RU54 273 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 PFDN1O60925 122 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 KRT6AP02538 564 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 KRT6BP04259 564 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 NTRK1P04629 796 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 DGKAP23743 735 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 CTNNB1P35222 781 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 SOAT1P35610 550 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 KRT6CP48668 564 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 CDC16Q13042 620 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 USP45Q70EL2 814 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 SERPINA9Q86WD7 417 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 STK40Q8N2I9 435 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 KLHDC9Q8NEP7 349 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 ELMO1Q92556 727 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 RTP3Q9BQQ7 232 aa13.49□□□□□ -0.25
CLIC4-201ENST00000374379 ULK1O75385 1050 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 AOC1P19801 751 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 ITPKAP23677 461 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 ATP6V0D1P61421 351 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 C6orf52Q5T4I8 152 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 ZFP1Q6P2D0 407 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 ZBTB46Q86UZ6 589 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 TMEM159Q96B96 161 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 IMP4Q96G21 291 aaKnown RBP13.48□□□□□ -0.25
CLIC4-201ENST00000374379 FEM1CQ96JP0 617 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 TLE6Q9H808 572 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 TMEM248Q9NWD8 314 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 AP4B1Q9Y6B7 739 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 ARHGAP10A1A4S6 786 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 M0QZQ0 153 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 ADAM12O43184 909 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 ITGBL1O95965 494 aaPredicted RBP13.48□□□□□ -0.25
CLIC4-201ENST00000374379 FAM58BPP0C7Q3 252 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 NCK1P16333 377 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 MRPL10Q7Z7H8 261 aaKnown RBP13.48□□□□□ -0.25
CLIC4-201ENST00000374379 TRAPPC5Q8IUR0 188 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 CMTM8Q8IZV2 173 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 FAM120BQ96EK7 910 aaKnown RBP13.48□□□□□ -0.25
CLIC4-201ENST00000374379 TSSK3Q96PN8 268 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 COPS8Q99627 209 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 OSGEPL1Q9H4B0 414 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 PRPF19Q9UMS4 504 aaKnown RBP13.48□□□□□ -0.25
CLIC4-201ENST00000374379 COL11A1P12107 1806 aaPredicted RBP13.48□□□□□ -0.25
CLIC4-201ENST00000374379 OR2AG2A6NM03 316 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 GPR39O43194 453 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 GSNP06396 782 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 CAPN1P07384 714 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 OR56A5P0C7T3 313 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 VAC14Q08AM6 782 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 OTUD1Q5VV17 481 aaPredicted RBP13.48□□□□□ -0.25
CLIC4-201ENST00000374379 REP15Q6BDI9 236 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 GCNT7Q6ZNI0 430 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 YAF2Q8IY57 180 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 C2CD4AQ8NCU7 369 aaPredicted RBP13.48□□□□□ -0.25
CLIC4-201ENST00000374379 ANKRD49Q8WVL7 239 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 CCDC106Q9BWC9 280 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 CERS4Q9HA82 394 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 ABCB8Q9NUT2 735 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 LTBP1Q14766 1721 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 I6L893 689 aaPredicted RBP13.48□□□□□ -0.25
CLIC4-201ENST00000374379 K7ERQ8 282 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 ARSAP15289 507 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 EPB42P16452 691 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 GDF5P43026 501 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 AGTR2P50052 363 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 CDKN2DP55273 166 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 SATB1Q01826 763 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 PTPRRQ15256 657 aa13.48□□□□□ -0.25
CLIC4-201ENST00000374379 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.48□□□□□ -0.252e-8■■■■■ 44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms