RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CRY1Q16526 586 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 SUPT20HL1Q3ZLR7 823 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 KIAA1841Q6NSI8 718 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 FAM183BPQ6ZVS7 135 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 LARP4Q71RC2 724 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRPF4-201ENST00000374198 ZBTB33Q86T24 672 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 PLD3Q8IV08 490 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 BRSK2Q8IWQ3 736 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 ZNF555Q8NEP9 628 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 TMBIM1Q969X1 311 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 ZNF717Q9BY31 904 aaPredicted RBP12.86□□□□□ -0.35
PRPF4-201ENST00000374198 XYLT2Q9H1B5 865 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 SMOC2Q9H3U7 446 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 ALG2Q9H553 416 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 EPS8L2Q9H6S3 715 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 EML4Q9HC35 981 aaKnown RBP12.86□□□□□ -0.35
PRPF4-201ENST00000374198 PAQR5Q9NXK6 330 aaPredicted RBP12.86□□□□□ -0.35
PRPF4-201ENST00000374198 GABBR1Q9UBS5 961 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 ACOT9Q9Y305 439 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 ARIH1Q9Y4X5 557 aaPredicted RBP12.86□□□□□ -0.35
PRPF4-201ENST00000374198 V9GYQ6 96 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 HACD1B0YJ81 288 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 POLR2CP19387 275 aaPredicted RBP12.86□□□□□ -0.35
PRPF4-201ENST00000374198 TNFSF9P41273 254 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 POLD2P49005 469 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 FKBP1BP68106 108 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 GPLD1P80108 840 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 DUOXA2Q1HG44 320 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 UGT3A2Q3SY77 523 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 TJAP1Q5JTD0 557 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 IDO2Q6ZQW0 420 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 RBM23Q86U06 439 aaKnown RBP12.86□□□□□ -0.35
PRPF4-201ENST00000374198 CUZD1Q86UP6 607 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 ZC3HC1Q86WB0 502 aaKnown RBP12.86□□□□□ -0.35
PRPF4-201ENST00000374198 UBQLNLQ8IYU4 475 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 SPATA6LQ8N4H0 392 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 BIRC7Q96CA5 298 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 LGALS12Q96DT0 336 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 ST6GAL2Q96JF0 529 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 RDH12Q96NR8 316 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 MKRN2Q9H000 416 aaKnown RBP12.86□□□□□ -0.35
PRPF4-201ENST00000374198 MMP27Q9H306 513 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 INTS6Q9UL03 887 aaKnown RBP12.86□□□□□ -0.35
PRPF4-201ENST00000374198 VANGL2Q9ULK5 521 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 MFHAS1Q9Y4C4 1052 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 ATP6AP2A0A1C7CYW4 349 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 CCDC154A6NI56 674 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 HAT1O14929 419 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 ATP6AP2O75787 350 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 LRIG2O94898 1065 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 HPRP00739 348 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 ALDOCP09972 364 aaKnown RBP12.86□□□□□ -0.35
PRPF4-201ENST00000374198 DDX5P17844 614 aaKnown RBP12.86□□□□□ -0.35
PRPF4-201ENST00000374198 CHRM3P20309 590 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 ARNTP27540 789 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 NUDT1P36639 197 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 DDOSTP39656 456 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 ZNF157P51786 506 aaPredicted RBP12.86□□□□□ -0.35
PRPF4-201ENST00000374198 KIF19Q2TAC6 998 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 RGMBQ6NW40 437 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 PNCKQ6P2M8 343 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 GLRX5Q86SX6 157 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 RIMKLAQ8IXN7 391 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 KIAA1958Q8N8K9 716 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 UBA3Q8TBC4 463 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 TMEM125Q96AQ2 219 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 DMRTB1Q96MA1 342 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 CITED4Q96RK1 184 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 MBOAT4Q96T53 435 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 FEM1AQ9BSK4 669 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 AMBRA1Q9C0C7 1298 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 TMEM39BQ9GZU3 492 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 FAM49AQ9H0Q0 323 aaPredicted RBP12.86□□□□□ -0.35
PRPF4-201ENST00000374198 OPTCQ9UBM4 332 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 PNMA8BQ9ULN7 279 aaPredicted RBP12.86□□□□□ -0.35
PRPF4-201ENST00000374198 PCDHA10Q9Y5I2 948 aa12.86□□□□□ -0.35
PRPF4-201ENST00000374198 NEMP2A6NFY4 417 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 H0Y626 953 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 ARHGAP33O14559 1287 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 GAS2O43903 313 aaKnown RBP12.85□□□□□ -0.35
PRPF4-201ENST00000374198 USP12O75317 370 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 PRSS23O95084 383 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 TRIM16O95361 564 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 FSHRP23945 695 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 ATP5F1P24539 256 aaPredicted RBP12.85□□□□□ -0.35
PRPF4-201ENST00000374198 SOX11P35716 441 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 PIGAP37287 484 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 OR3A3P47888 321 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 CDH8P55286 799 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 PTPN11Q06124 597 aaPredicted RBP12.85□□□□□ -0.35
PRPF4-201ENST00000374198 ZNF404Q494X3 552 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 YIF1BQ5BJH7 314 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 NBPF12Q5TAG4 269 aaPredicted RBP12.85□□□□□ -0.35
PRPF4-201ENST00000374198 NCBP2-AS2Q69YL0 99 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 ADAMTSL2Q86TH1 951 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 NT5DC4Q86YG4 428 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 SLC41A1Q8IVJ1 513 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 FAM109AQ8N4B1 249 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 PSD4Q8NDX1 1056 aa12.85□□□□□ -0.35
PRPF4-201ENST00000374198 CHURC1Q8WUH1 139 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms