RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 UGT2B11O75310 529 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 CKMT2P17540 419 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 CTPS1P17812 591 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 ZNF252P-AS1Q0IIN9 211 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 OLIG2Q13516 323 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 CEP78Q5JTW2 689 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 CGB2Q6NT52 195 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 ERI1Q8IV48 349 aaKnown RBP17.34■□□□□ 0.37
PTPRU-202ENST00000373779 CFAP52Q8N1V2 620 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 NFKBIZQ9BYH8 718 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 IMPDH1P20839 514 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 CHRNA4P43681 627 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 HCAR3P49019 387 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 CYP4Z2PQ8N1L4 340 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 PNPT1Q8TCS8 783 aaKnown RBP17.34■□□□□ 0.37
PTPRU-202ENST00000373779 ACBD6Q9BR61 282 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 GMIPQ9P107 970 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 SAMD4AQ9UPU9 718 aaKnown RBP17.34■□□□□ 0.37
PTPRU-202ENST00000373779 MAPRE3Q9UPY8 281 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 A0A088AWK7 358 aa17.33■□□□□ 0.37
PTPRU-202ENST00000373779 NDST2P52849 883 aa17.33■□□□□ 0.37
PTPRU-202ENST00000373779 MERTKQ12866 999 aa17.33■□□□□ 0.37
PTPRU-202ENST00000373779 TRIQKQ629K1 86 aa17.33■□□□□ 0.37
PTPRU-202ENST00000373779 TADA1Q96BN2 335 aa17.33■□□□□ 0.37
PTPRU-202ENST00000373779 CORO2BQ9UQ03 480 aa17.33■□□□□ 0.37
PTPRU-202ENST00000373779 DGKBQ9Y6T7 804 aa17.33■□□□□ 0.37
PTPRU-202ENST00000373779 A8MT66 165 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 LRATO95237 230 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 FAM151BQ6UXP7 276 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.33■□□□□ 0.361e-6■■■■■ 27.9
PTPRU-202ENST00000373779 RNASEH1O60930 286 aaKnown RBP17.33■□□□□ 0.36
PTPRU-202ENST00000373779 BCAS2O75934 225 aaPredicted RBP17.33■□□□□ 0.36
PTPRU-202ENST00000373779 IMPDH2P12268 514 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 NUDT18Q6ZVK8 323 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 HIPK1Q86Z02 1210 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 DEPDC4Q8N2C3 294 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 MRPL9Q9BYD2 267 aaKnown RBP17.33■□□□□ 0.36
PTPRU-202ENST00000373779 CYTH4Q9UIA0 394 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 BTBD3Q9Y2F9 522 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 ELOVL7A1L3X0 281 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 MATN2O00339 956 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 OR4Q2P0C623 313 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 MAPK8P45983 427 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 GNPDA1P46926 289 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 TRMT11Q7Z4G4 463 aaKnown RBP17.33■□□□□ 0.36
PTPRU-202ENST00000373779 DCBLD1Q8N8Z6 715 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 PROX1Q92786 737 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 PCDH12Q9NPG4 1184 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 NUDT4Q9NZJ9 180 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 PCDHB9Q9Y5E1 797 aa17.33■□□□□ 0.36
PTPRU-202ENST00000373779 E7ENX8 843 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 BCKDKO14874 412 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 AHSGP02765 367 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 HERVK_113P63132 956 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 NOL9Q5SY16 702 aaKnown RBP17.32■□□□□ 0.36
PTPRU-202ENST00000373779 DET1Q7L5Y6 550 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 CLHC1Q8NHS4 586 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 CANT1Q8WVQ1 401 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 ERVK-6Q9BXR3 956 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 NUSAP1Q9BXS6 441 aaKnown RBP17.32■□□□□ 0.36
PTPRU-202ENST00000373779 TTLL13PA6NNM8 815 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 CYP2A6P11509 494 aaPredicted RBP17.32■□□□□ 0.36
PTPRU-202ENST00000373779 PIWIL1Q96J94 861 aaKnown RBP17.32■□□□□ 0.36
PTPRU-202ENST00000373779 TRNAU1APQ9NX07 287 aaKnown RBP17.32■□□□□ 0.36
PTPRU-202ENST00000373779 CRNNQ9UBG3 495 aaPredicted RBP17.32■□□□□ 0.36
PTPRU-202ENST00000373779 ZNF490Q9ULM2 529 aaPredicted RBP17.32■□□□□ 0.36
PTPRU-202ENST00000373779 PHLPP1O60346 1717 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 PRMT5O14744 637 aaPredicted RBP17.32■□□□□ 0.36
PTPRU-202ENST00000373779 ALDOAP04075 364 aaKnown RBP17.32■□□□□ 0.36
PTPRU-202ENST00000373779 YBEYP58557 167 aaPredicted RBP17.32■□□□□ 0.36
PTPRU-202ENST00000373779 CLDN10P78369 228 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 MAGEB10Q96LZ2 347 aaPredicted RBP17.32■□□□□ 0.36
PTPRU-202ENST00000373779 LRTM1Q9HBL6 345 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 H3BSA7 217 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 GABRDO14764 452 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 TBL1XO60907 577 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 PABPC1P11940 636 aaKnown RBP17.32■□□□□ 0.36
PTPRU-202ENST00000373779 SMPD1P17405 629 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 MYL12AP19105 171 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 IGFBP5P24593 272 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 DGKKQ5KSL6 1271 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 GALNT5Q7Z7M9 940 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 PLD6Q8N2A8 252 aaKnown RBP17.32■□□□□ 0.36
PTPRU-202ENST00000373779 ENKURQ8TC29 256 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 ELMO1Q92556 727 aa17.32■□□□□ 0.36
PTPRU-202ENST00000373779 FAM25AB3EWG3 89 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 FAM25CB3EWG5 89 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 FAM25GB3EWG6 89 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 FADS2O95864 444 aaKnown RBP17.31■□□□□ 0.36
PTPRU-202ENST00000373779 CATP04040 527 aaKnown RBP17.31■□□□□ 0.36
PTPRU-202ENST00000373779 T-ENOLP0DO92 83 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 DNAJB1P25685 340 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 LDLRAP1Q5SW96 308 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 ADGRG6Q86SQ4 1221 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 PACRGLQ8N7B6 248 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 KCTD13Q8WZ19 329 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 EMID1Q96A84 441 aaPredicted RBP17.31■□□□□ 0.36
PTPRU-202ENST00000373779 PCDHB1Q9Y5F3 818 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 PLCH1Q4KWH8 1693 aa17.31■□□□□ 0.36
PTPRU-202ENST00000373779 EI24O14681 340 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms