RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 GALNT13Q8IUC8 556 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 KLHDC8BQ8IXV7 354 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 GALNT15Q8N3T1 639 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 TTC30BQ8N4P2 665 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 TAB3Q8N5C8 712 aaPredicted RBP11.93□□□□□ -0.5
HDAC8-201ENST00000373554 PDCD7Q8N8D1 485 aaKnown RBP11.93□□□□□ -0.5
HDAC8-201ENST00000373554 ARL10Q8N8L6 244 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 OR2M4Q96R27 311 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 NAP1L3Q99457 506 aaPredicted RBP11.93□□□□□ -0.5
HDAC8-201ENST00000373554 SCNM1Q9BWG6 230 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 BOCQ9BWV1 1114 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 GSDMCQ9BYG8 508 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 ARNT2Q9HBZ2 717 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.93□□□□□ -0.5
HDAC8-201ENST00000373554 IL17CQ9P0M4 197 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 SIRPGQ9P1W8 387 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 GPR34Q9UPC5 381 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 TMEM98Q9Y2Y6 226 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 NEUROG3Q9Y4Z2 214 aa11.93□□□□□ -0.5
HDAC8-201ENST00000373554 GLYATL1P3A0A0U1RQE8 302 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 B4DGG1 531 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 BUD23O43709 281 aaKnown RBP11.92□□□□□ -0.5
HDAC8-201ENST00000373554 TOP3BO95985 862 aaKnown RBP11.92□□□□□ -0.5
HDAC8-201ENST00000373554 ATP1A1P05023 1023 aaKnown RBP11.92□□□□□ -0.5
HDAC8-201ENST00000373554 GP1BAP07359 652 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 SPINK2P20155 84 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 LPOP22079 712 aaPredicted RBP11.92□□□□□ -0.5
HDAC8-201ENST00000373554 FDFT1P37268 417 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 ADCY8P40145 1251 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 LMAN1P49257 510 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 PEX6Q13608 980 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 KCTD11Q693B1 232 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 FAM151BQ6UXP7 276 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 LINC00523Q86TU6 105 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 SLC35F3Q8IY50 421 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 FAM46DQ8NEK8 389 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 BRSK1Q8TDC3 778 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 NAT6Q93015 286 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 GLYATL1Q969I3 302 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 SCARF2Q96GP6 870 aaPredicted RBP11.92□□□□□ -0.5
HDAC8-201ENST00000373554 VPS35Q96QK1 796 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 DPEP2Q9H4A9 486 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 RMI1Q9H9A7 625 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 RAB6BQ9NRW1 208 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 PAK5Q9P286 719 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 GULP1Q9UBP9 304 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 CNOT6Q9ULM6 557 aaKnown RBP11.92□□□□□ -0.5
HDAC8-201ENST00000373554 WASF3Q9UPY6 502 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 GPSM3Q9Y4H4 160 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 ARL5AQ9Y689 179 aa11.92□□□□□ -0.5
HDAC8-201ENST00000373554 OAS3Q9Y6K5 1087 aaKnown RBP11.92□□□□□ -0.5
HDAC8-201ENST00000373554 CHD6Q8TD26 2715 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 SCN8AQ9UQD0 1980 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 LY6G6EA0A0G2JKS1 128 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 CPED1A4D0V7 1026 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 EME2A4GXA9 379 aaPredicted RBP11.91□□□□□ -0.5
HDAC8-201ENST00000373554 USP27XA6NNY8 438 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 GPR89AB7ZAQ6 455 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 PGRMC1O00264 195 aaKnown RBP11.91□□□□□ -0.5
HDAC8-201ENST00000373554 GAS8O95995 478 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 FUCA1P04066 466 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 GPR89BP0CG08 455 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 MYF5P13349 255 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 E2F1Q01094 437 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 ITGA9Q13797 1035 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 LRP8Q14114 963 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 SMAD1Q15797 465 aaKnown RBP11.91□□□□□ -0.5
HDAC8-201ENST00000373554 PYCR3Q53H96 274 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 DENND5AQ6IQ26 1287 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 GUSBP11Q6P575 273 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 C4orf22Q6V702 233 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 TMPRSS7Q7RTY8 843 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 EFL1Q7Z2Z2 1120 aaKnown RBP11.91□□□□□ -0.5
HDAC8-201ENST00000373554 RASGEF1CQ8N431 466 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 KYQ8NBH2 561 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 CCL4L1Q8NHW4 92 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 GDAP1Q8TB36 358 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 IFI44Q8TCB0 444 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 DTX3LQ8TDB6 740 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 GPBAR1Q8TDU6 330 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 PTCD2Q8WV60 388 aaKnown RBP11.91□□□□□ -0.5
HDAC8-201ENST00000373554 OSBPL9Q96SU4 736 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 ZCCHC2Q9C0B9 1178 aaKnown RBP11.91□□□□□ -0.5
HDAC8-201ENST00000373554 TRIM39Q9HCM9 518 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 IL26Q9NPH9 171 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 ZNHIT2Q9UHR6 403 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 KLK13Q9UKR3 277 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 TTC7AQ9ULT0 858 aaPredicted RBP11.91□□□□□ -0.5
HDAC8-201ENST00000373554 PYCARDQ9ULZ3 195 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 PADI4Q9UM07 663 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 SNX12Q9UMY4 172 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 DRG1Q9Y295 367 aaKnown RBP11.91□□□□□ -0.5
HDAC8-201ENST00000373554 U3KQA8 63 aa11.91□□□□□ -0.5
HDAC8-201ENST00000373554 ARID1BQ8NFD5 2236 aaPredicted RBP11.9□□□□□ -0.5
HDAC8-201ENST00000373554 GOLGA6L10A0A0M3HER8 536 aa11.9□□□□□ -0.5
HDAC8-201ENST00000373554 CES2O00748 559 aa11.9□□□□□ -0.5
HDAC8-201ENST00000373554 VEGFDO43915 354 aa11.9□□□□□ -0.5
HDAC8-201ENST00000373554 PRAMEF1O95521 474 aa11.9□□□□□ -0.5
HDAC8-201ENST00000373554 ETS1P14921 441 aa11.9□□□□□ -0.5
HDAC8-201ENST00000373554 TCP1P17987 556 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms