RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 RD3Q7Z3Z2 195 aa18.19■□□□□ 0.5
PBX3-202ENST00000373482 HOOK3Q86VS8 718 aa18.19■□□□□ 0.5
PBX3-202ENST00000373482 PHYKPLQ8IUZ5 450 aa18.19■□□□□ 0.5
PBX3-202ENST00000373482 HID1Q8IV36 788 aa18.19■□□□□ 0.5
PBX3-202ENST00000373482 PHACTR4Q8IZ21 702 aa18.19■□□□□ 0.5
PBX3-202ENST00000373482 NAT8LQ8N9F0 302 aa18.19■□□□□ 0.5
PBX3-202ENST00000373482 GLYATL1Q969I3 302 aa18.19■□□□□ 0.5
PBX3-202ENST00000373482 SNF8Q96H20 258 aa18.19■□□□□ 0.5
PBX3-202ENST00000373482 COX14Q96I36 57 aa18.19■□□□□ 0.5
PBX3-202ENST00000373482 DNAJC1Q96KC8 554 aaKnown RBP18.19■□□□□ 0.5
PBX3-202ENST00000373482 VPS35Q96QK1 796 aa18.19■□□□□ 0.5
PBX3-202ENST00000373482 APOBEC3BQ9UH17 382 aaKnown RBP18.19■□□□□ 0.5
PBX3-202ENST00000373482 TCAF1Q9Y4C2 921 aa18.19■□□□□ 0.5
PBX3-202ENST00000373482 PRSS38A1L453 326 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 GOLGA8MH3BSY2 632 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 RAD51CO43502 376 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 PCDHGA12O60330 932 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 SRP72O76094 671 aaKnown RBP18.18■□□□□ 0.5
PBX3-202ENST00000373482 PRAMEF1O95521 474 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 CTSEP14091 401 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 MGAT1P26572 445 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 EPHA8P29322 1005 aaPredicted RBP18.18■□□□□ 0.5
PBX3-202ENST00000373482 HK3P52790 923 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 CHRNA6Q15825 494 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 ALG11Q2TAA5 492 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 INAVAQ3KP66 663 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 TSTD2Q5T7W7 516 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 ARMC3Q5W041 872 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 DOK6Q6PKX4 331 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 ZNF534Q76KX8 674 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 BBOF1Q8ND07 529 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 GDAP1Q8TB36 358 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 ZNF398Q8TD17 642 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 PEX13Q92968 403 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 TSACCQ96A04 125 aaPredicted RBP18.18■□□□□ 0.5
PBX3-202ENST00000373482 FRMD8Q9BZ67 464 aaPredicted RBP18.18■□□□□ 0.5
PBX3-202ENST00000373482 TRIM31Q9BZY9 425 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 CYP4F12Q9HCS2 524 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 SAMD15Q9P1V8 674 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 VPS18Q9P253 973 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 RIMKLBQ9ULI2 386 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 CNOT6Q9ULM6 557 aaKnown RBP18.18■□□□□ 0.5
PBX3-202ENST00000373482 UTP11Q9Y3A2 253 aaKnown RBP18.18■□□□□ 0.5
PBX3-202ENST00000373482 SLC30A1Q9Y6M5 507 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 DGKBQ9Y6T7 804 aa18.18■□□□□ 0.5
PBX3-202ENST00000373482 GOLGA4Q13439 2230 aaKnown RBP18.18■□□□□ 0.5
PBX3-202ENST00000373482 CCDC78A2IDD5 438 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 CTAGE15A4D2H0 777 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 H7C0S8 307 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 FLRT2O43155 660 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 PIAS2O75928 621 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 CEACAM5P06731 702 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 CTAGE8P0CG41 777 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 ITGALP20701 1170 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 IVDP26440 423 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 BNIP3Q12983 259 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 MORF4L2Q15014 288 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 SHBQ15464 509 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 ATP13A5Q4VNC0 1218 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 DNTTIP2Q5QJE6 756 aaKnown RBP18.17■□□□□ 0.5
PBX3-202ENST00000373482 CTAGE6Q86UF2 777 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 TRIM74Q86UV6 250 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 CTAGE4Q8IX94 777 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 PTCD2Q8WV60 388 aaKnown RBP18.17■□□□□ 0.5
PBX3-202ENST00000373482 PDXPQ96GD0 296 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 CDKN2AIPNLQ96HQ2 116 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 TBATAQ96M53 351 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 SERPINB12Q96P63 405 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 RAB17Q9H0T7 212 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 ASB8Q9H765 288 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 FGF22Q9HCT0 170 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 MRPL40Q9NQ50 206 aaKnown RBP18.17■□□□□ 0.5
PBX3-202ENST00000373482 SPASTQ9UBP0 616 aa18.17■□□□□ 0.5
PBX3-202ENST00000373482 NEMP2A6NFY4 417 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 GAPDHSO14556 408 aaPredicted RBP18.16■□□□□ 0.5
PBX3-202ENST00000373482 SLC30A4O14863 429 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 SDC3O75056 442 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 IVLP07476 585 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 DGKAP23743 735 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 MC4RP32245 332 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 PRAMEP78395 509 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 CRADDP78560 199 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 CALCOCO2Q13137 446 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 NFATC2Q13469 925 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 PEX6Q13608 980 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 PRRT3Q5FWE3 981 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 LDLRAP1Q5SW96 308 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 C8orf74Q6P047 294 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 CASC4Q6P4E1 433 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 SNX20Q7Z614 316 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 CAND1Q86VP6 1230 aaKnown RBP18.16■□□□□ 0.5
PBX3-202ENST00000373482 GATAD2AQ86YP4 633 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 RBFAQ8N0V3 343 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 CEP112Q8N8E3 955 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 SAP25Q8TEE9 199 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 SETD7Q8WTS6 366 aaKnown RBP18.16■□□□□ 0.5
PBX3-202ENST00000373482 OR1E3Q8WZA6 343 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 ULK4Q96C45 1275 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 TTC25Q96NG3 672 aa18.16■□□□□ 0.5
PBX3-202ENST00000373482 ERP44Q9BS26 406 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms