RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 CYP7B1O75881 506 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 CXCR2P25025 360 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 RPL19P84098 196 aaKnown RBP14.16□□□□□ -0.14
LMX1B-202ENST00000373474 PPM1JQ5JR12 505 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 ZDHHC24Q6UX98 284 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 GPR180Q86V85 440 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 ZDHHC18Q9NUE0 388 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 ST3GAL5Q9UNP4 418 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 SPEF1Q9Y4P9 236 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 METTL21EPA6NDL7 271 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 CAPN8A6NHC0 703 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 QSOX1O00391 747 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 NTRK1P04629 796 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 PTPN9P43378 593 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 IDH3AP50213 366 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 GBE1Q04446 702 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 BTG3Q14201 252 aaPredicted RBP14.16□□□□□ -0.14
LMX1B-202ENST00000373474 XKR6Q5GH73 641 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 ANXA8L1Q5VT79 327 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 GPR142Q7Z601 462 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 FAM47BQ8NA70 645 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 PDZD7Q9H5P4 517 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 SMIM35A0A1B0GVV1 85 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 PIRTP0C851 137 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 KCNA10Q16322 511 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 INTS6LQ5JSJ4 861 aaKnown RBP14.16□□□□□ -0.14
LMX1B-202ENST00000373474 LCN1P1Q5VSP4 162 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 RNF220Q5VTB9 566 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 ESRP1Q6NXG1 681 aaKnown RBP14.16□□□□□ -0.14
LMX1B-202ENST00000373474 ULK3Q6PHR2 472 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 HJURPQ8NCD3 748 aaPredicted RBP14.16□□□□□ -0.14
LMX1B-202ENST00000373474 NXNL1Q96CM4 212 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 CADM1Q9BY67 442 aaKnown RBP14.16□□□□□ -0.14
LMX1B-202ENST00000373474 C12orf4Q9NQ89 552 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 LYVE1Q9Y5Y7 322 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 UMPSP11172 480 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 SP100P23497 879 aaPredicted RBP14.16□□□□□ -0.14
LMX1B-202ENST00000373474 PFKPQ01813 784 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 SPIBQ01892 262 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 PRAMEF19Q5SWL8 479 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 TREML2Q5T2D2 321 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 SPPL2CQ8IUH8 684 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 HM13Q8TCT9 377 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 PPP1R13LQ8WUF5 828 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 PIK3R3Q92569 461 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 PPP1R16AQ96I34 528 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 DHRS7Q9Y394 339 aa14.16□□□□□ -0.14
LMX1B-202ENST00000373474 SAMHD1Q9Y3Z3 626 aaKnown RBP14.16□□□□□ -0.14
LMX1B-202ENST00000373474 EPORP19235 508 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 HTR7P34969 479 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 SCN1BQ07699 218 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 BLMHQ13867 455 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 C6orf52Q5T4I8 152 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 TRIM74Q86UV6 250 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 TRIM73Q86UV7 250 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 KBTBD7Q8WVZ9 684 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 GNEQ9Y223 722 aaKnown RBP14.15□□□□□ -0.14
LMX1B-202ENST00000373474 SLC9A8Q9Y2E8 581 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 NR2E1Q9Y466 385 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 GRIN2DO15399 1336 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 TRAV19A0A0A6YYK7 116 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 RFXANKO14593 260 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 TFECO14948 347 aaPredicted RBP14.15□□□□□ -0.14
LMX1B-202ENST00000373474 UNGP13051 313 aaPredicted RBP14.15□□□□□ -0.14
LMX1B-202ENST00000373474 NELFEP18615 380 aaKnown RBP14.15□□□□□ -0.14
LMX1B-202ENST00000373474 POLR2JP52435 117 aaKnown RBP14.15□□□□□ -0.14
LMX1B-202ENST00000373474 BHLHB9Q6PI77 547 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 RBFAQ8N0V3 343 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 CPSF7Q8N684 471 aaKnown RBP14.15□□□□□ -0.14
LMX1B-202ENST00000373474 LEMD2Q8NC56 503 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 ZC3H10Q96K80 434 aaKnown RBP14.15□□□□□ -0.14
LMX1B-202ENST00000373474 PTTG2Q9NZH5 202 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 PMF1-BGLAPU3KQ54 211 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 LMO7Q8WWI1 1683 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 A0A1W2PQ72 361 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 CCDC189A1A4V9 331 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 LYNP07948 512 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 CCNCP24863 283 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 MSX2P35548 267 aaPredicted RBP14.15□□□□□ -0.14
LMX1B-202ENST00000373474 BTN3A2P78410 334 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 GALNT18Q6P9A2 607 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 CRTC3Q6UUV7 619 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 IRGQQ8WZA9 623 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 PANX1Q96RD7 426 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 AJAP1Q9UKB5 411 aaPredicted RBP14.15□□□□□ -0.14
LMX1B-202ENST00000373474 KPNA3O00505 521 aaPredicted RBP14.15□□□□□ -0.14
LMX1B-202ENST00000373474 PQBP1O60828 265 aaKnown RBP14.15□□□□□ -0.14
LMX1B-202ENST00000373474 TCEA3O75764 348 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 DLG2Q15700 870 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 VWA5B1Q5TIE3 1220 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 AGO3Q9H9G7 860 aaKnown RBP14.15□□□□□ -0.14
LMX1B-202ENST00000373474 ADGRE2Q9UHX3 823 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 ZNF232Q9UNY5 417 aa14.15□□□□□ -0.14
LMX1B-202ENST00000373474 DPPA5A6NC42 116 aa14.15□□□□□ -0.15
LMX1B-202ENST00000373474 KCNU1A8MYU2 1149 aa14.15□□□□□ -0.15
LMX1B-202ENST00000373474 FAM25EA8MYX2 175 aa14.15□□□□□ -0.15
LMX1B-202ENST00000373474 LRIG2O94898 1065 aa14.15□□□□□ -0.15
LMX1B-202ENST00000373474 CDH13P55290 713 aa14.15□□□□□ -0.15
LMX1B-202ENST00000373474 AP3S2P59780 193 aa14.15□□□□□ -0.15
LMX1B-202ENST00000373474 ZFP28Q8NHY6 868 aa14.15□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms