RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 LPIN1Q14693 890 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 IL31Q6EBC2 164 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 ALG1LQ6GMV1 187 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 LPCAT2Q7L5N7 544 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 CIR1Q86X95 450 aaPredicted RBP12.69□□□□□ -0.38
CTPS1-202ENST00000372621 MYEOVQ96EZ4 313 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 FUBP3Q96I24 572 aaKnown RBP eCLIP12.69□□□□□ -0.38
CTPS1-202ENST00000372621 TEX37Q96LM6 180 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 BIRC8Q96P09 236 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 ADI1Q9BV57 179 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 C1QTNF3Q9BXJ4 246 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 TRIM54Q9BYV2 358 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 INTS10Q9NVR2 710 aaKnown RBP12.69□□□□□ -0.38
CTPS1-202ENST00000372621 BTRCQ9Y297 605 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 OAS3Q9Y6K5 1087 aaKnown RBP12.69□□□□□ -0.38
CTPS1-202ENST00000372621 VWA8A3KMH1 1905 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 A0A1W2PP18 115 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 IGLV3-27P01718 113 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 RPS17P08708 135 aaKnown RBP12.69□□□□□ -0.38
CTPS1-202ENST00000372621 C7P10643 843 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 IL10P22301 178 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 FASP25445 335 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 EEF1DP29692 281 aaKnown RBP12.69□□□□□ -0.38
CTPS1-202ENST00000372621 GRK4P32298 578 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 THPOP40225 353 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 GRIK2Q13002 908 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 TRIP4Q15650 581 aaPredicted RBP12.69□□□□□ -0.38
CTPS1-202ENST00000372621 GEN1Q17RS7 908 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 ZNF354CQ86Y25 554 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 TRPV3Q8NET8 790 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 STAG3L4Q8TBR4 150 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 CENPNQ96H22 339 aaPredicted RBP12.69□□□□□ -0.38
CTPS1-202ENST00000372621 FRMPD3Q5JV73 1810 aa12.69□□□□□ -0.38
CTPS1-202ENST00000372621 RASAL1O95294 804 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 XKR7Q5GH72 579 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 DHRS4L2Q6PKH6 230 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 PAQR3Q6TCH7 311 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 PAPD5Q8NDF8 572 aaKnown RBP12.68□□□□□ -0.38
CTPS1-202ENST00000372621 DIS3LQ8TF46 1054 aaKnown RBP12.68□□□□□ -0.38
CTPS1-202ENST00000372621 CDKN2AIPNLQ96HQ2 116 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 ZNF599Q96NL3 588 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 MUC3BQ9H195 1237 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 PREBQ9HCU5 417 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 CIDEBQ9UHD4 219 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 ZNF225Q9UK10 706 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 LCHNA4D1U4 455 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 IQCA1LA6NCM1 817 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 KLK8O60259 260 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 GPIP06744 558 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 PIRTP0C851 137 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 ZNF140P52738 457 aaPredicted RBP12.68□□□□□ -0.38
CTPS1-202ENST00000372621 ECT2LQ008S8 904 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 SPATA19Q7Z5L4 167 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 KLHDC9Q8NEP7 349 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 C9orf16Q9BUW7 83 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 TRIM8Q9BZR9 551 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 MUC13Q9H3R2 512 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 LIN28AQ9H9Z2 209 aaKnown RBP12.68□□□□□ -0.38
CTPS1-202ENST00000372621 SYTL2Q9HCH5 934 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.68□□□□□ -0.38
CTPS1-202ENST00000372621 AIG1Q9NVV5 245 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 OAZ3Q9UMX2 235 aa12.68□□□□□ -0.38
CTPS1-202ENST00000372621 A0A087WXM4 84 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 ECI2O75521 394 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 EEDO75530 441 aaKnown RBP12.67□□□□□ -0.38
CTPS1-202ENST00000372621 CYBBP04839 570 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 RPLP2P05387 115 aaKnown RBP12.67□□□□□ -0.38
CTPS1-202ENST00000372621 YBEYP58557 167 aaPredicted RBP12.67□□□□□ -0.38
CTPS1-202ENST00000372621 CTBSQ01459 385 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 ZNF280BQ86YH2 543 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 FBXO39Q8N4B4 442 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 FUBP1Q96AE4 644 aaKnown RBP12.67□□□□□ -0.38
CTPS1-202ENST00000372621 NSMCE3Q96MG7 304 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 BRINP2Q9C0B6 783 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 ALG2Q9H553 416 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 SEMA4BQ9NPR2 832 aaPredicted RBP12.67□□□□□ -0.38
CTPS1-202ENST00000372621 C8orf4Q9NR00 106 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 NLE1Q9NVX2 485 aaPredicted RBP12.67□□□□□ -0.38
CTPS1-202ENST00000372621 PSMA3P25788 255 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 PRDX3P30048 256 aaKnown RBP12.67□□□□□ -0.38
CTPS1-202ENST00000372621 OR1E1P30953 314 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 MAPKAPK2P49137 400 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 GSK3BP49841 420 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 DCTN2Q13561 401 aaKnown RBP12.67□□□□□ -0.38
CTPS1-202ENST00000372621 FXNQ16595 210 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 RABL3Q5HYI8 236 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 PAGE3Q5JUK9 113 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 TNIP2Q8NFZ5 429 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 RNF217Q8TC41 542 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 RPRD1AQ96P16 312 aaPredicted RBP12.67□□□□□ -0.38
CTPS1-202ENST00000372621 RNF112Q9ULX5 631 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 SUPT3HB4E1H0 165 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 ZNF701M0R085 212 aaPredicted RBP12.67□□□□□ -0.38
CTPS1-202ENST00000372621 SUPT3HO75486 399 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 MTHFD1P11586 935 aaKnown RBP12.67□□□□□ -0.38
CTPS1-202ENST00000372621 TSNQ15631 228 aaKnown RBP12.67□□□□□ -0.38
CTPS1-202ENST00000372621 TBC1D25Q3MII6 688 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 ZBED5Q49AG3 693 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 TMTC4Q5T4D3 741 aa12.67□□□□□ -0.38
CTPS1-202ENST00000372621 ANKS6Q68DC2 871 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms