RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 STAMBPL1Q96FJ0 436 aa16.22■□□□□ 0.19
TMEM53-203ENST00000372242 FCRL3Q96P31 734 aaPredicted RBP16.22■□□□□ 0.19
TMEM53-203ENST00000372242 WDR83Q9BRX9 315 aaKnown RBP16.22■□□□□ 0.19
TMEM53-203ENST00000372242 FAM114A2Q9NRY5 505 aa16.22■□□□□ 0.19
TMEM53-203ENST00000372242 GPR27Q9NS67 375 aa16.22■□□□□ 0.19
TMEM53-203ENST00000372242 TREX1Q9NSU2 369 aa16.22■□□□□ 0.19
TMEM53-203ENST00000372242 ZDHHC18Q9NUE0 388 aa16.22■□□□□ 0.19
TMEM53-203ENST00000372242 APPL1Q9UKG1 709 aa16.22■□□□□ 0.19
TMEM53-203ENST00000372242 SLC6A14Q9UN76 642 aa16.22■□□□□ 0.19
TMEM53-203ENST00000372242 SNX11Q9Y5W9 270 aa16.22■□□□□ 0.19
TMEM53-203ENST00000372242 OTOGLQ3ZCN5 2332 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 KNL1Q8NG31 2342 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 CCDC162PA2VCL2 907 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 TMEM202A6NGA9 273 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 KHNYNO15037 678 aaKnown RBP16.21■□□□□ 0.19
TMEM53-203ENST00000372242 PRSS56P0CW18 603 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 PSMA3P25788 255 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 ELK3P41970 407 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 CARSP49589 748 aaKnown RBP16.21■□□□□ 0.19
TMEM53-203ENST00000372242 CDKN1CP49918 316 aaPredicted RBP16.21■□□□□ 0.19
TMEM53-203ENST00000372242 NXPH1P58417 271 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 CAV1Q03135 178 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 GRIK2Q13002 908 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 ZNF648Q5T619 568 aaPredicted RBP16.21■□□□□ 0.19
TMEM53-203ENST00000372242 KCTD16Q68DU8 428 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 PNPLA1Q8N8W4 532 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 OR6P1Q8NGX9 317 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 SKA1Q96BD8 255 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 HIC2Q96JB3 615 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 C19orf43Q9BQ61 176 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 NUSAP1Q9BXS6 441 aaKnown RBP16.21■□□□□ 0.19
TMEM53-203ENST00000372242 ASB8Q9H765 288 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 MRM3Q9HC36 420 aaKnown RBP16.21■□□□□ 0.19
TMEM53-203ENST00000372242 PARD6AQ9NPB6 346 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 PHPT1Q9NRX4 125 aaPredicted RBP16.21■□□□□ 0.19
TMEM53-203ENST00000372242 SEMA4GQ9NTN9 838 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 IL1RAPL1Q9NZN1 696 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 RIMKLBQ9ULI2 386 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 CHMP2BQ9UQN3 213 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 RPS6KL1Q9Y6S9 549 aa16.21■□□□□ 0.19
TMEM53-203ENST00000372242 DNAH14Q0VDD8 3507 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 SPTY2D1-AS1A0A0U1RR47 76 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 FAM237BA0A1B0GVD1 139 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 MAGEB16A2A368 324 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 H7C0S8 307 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 CACNB4O00305 520 aaPredicted RBP16.2■□□□□ 0.18
TMEM53-203ENST00000372242 MTX2O75431 263 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 SLC25A14O95258 325 aaPredicted RBP16.2■□□□□ 0.18
TMEM53-203ENST00000372242 ZNF806P0C7X5 589 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 MYCLP1P12525 358 aaPredicted RBP16.2■□□□□ 0.18
TMEM53-203ENST00000372242 PRAMEP78395 509 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 NFATC2Q13469 925 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 FZD2Q14332 565 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 HLTFQ14527 1009 aaKnown RBP eCLIP16.2■□□□□ 0.18
TMEM53-203ENST00000372242 NFATC4Q14934 902 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 ANKRD20A4Q4UJ75 823 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 ZNF542PQ5EBM4 170 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 ZRANB3Q5FWF4 1079 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 DOK6Q6PKX4 331 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 TMEM135Q86UB9 458 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 CCDC25Q86WR0 208 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 OR2I1PQ8NGU4 316 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 FAM174AQ8TBP5 190 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 BTN2A2Q8WVV5 523 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 GLYATL1Q969I3 302 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 ZNF669Q96BR6 464 aaPredicted RBP16.2■□□□□ 0.18
TMEM53-203ENST00000372242 EBNA1BP2Q99848 306 aaKnown RBP16.2■□□□□ 0.18
TMEM53-203ENST00000372242 PNMA8BQ9ULN7 279 aaPredicted RBP16.2■□□□□ 0.18
TMEM53-203ENST00000372242 TMEM98Q9Y2Y6 226 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 TEX264Q9Y6I9 313 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 OAS3Q9Y6K5 1087 aaKnown RBP16.2■□□□□ 0.18
TMEM53-203ENST00000372242 SLC30A1Q9Y6M5 507 aa16.2■□□□□ 0.18
TMEM53-203ENST00000372242 TP53BP1Q12888 1972 aaPredicted RBP16.2■□□□□ 0.18
TMEM53-203ENST00000372242 CACNA1EQ15878 2313 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 VAPBO95292 243 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 GOT2P00505 430 aaKnown RBP16.19■□□□□ 0.18
TMEM53-203ENST00000372242 PYGLP06737 847 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 ARNTP27540 789 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 TEAD1P28347 426 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 CTSKP43235 329 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 POLD2P49005 469 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 ITGA9Q13797 1035 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 ENPP7Q6UWV6 458 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 CENPUQ71F23 418 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 ZBED8Q8IZ13 594 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 GDAP1Q8TB36 358 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 PEX13Q92968 403 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 COX14Q96I36 57 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 GDF3Q9NR23 364 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.19■□□□□ 0.18
TMEM53-203ENST00000372242 V9GYY5 206 aaPredicted RBP16.19■□□□□ 0.18
TMEM53-203ENST00000372242 TMEM131Q92545 1883 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 LNP1A1A4G5 178 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 GOLGA8KD6RF30 607 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 E7ESA3 106 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 GOLGA8TH3BQL2 631 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 ARHGAP33O14559 1287 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 TOR1BO14657 336 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 SCAMP1O15126 338 aa16.19■□□□□ 0.18
TMEM53-203ENST00000372242 MAGEC1O60732 1142 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms