RNA–Protein interactions for RNA: ENST00000371725.7

SDCCAG3-204, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDCCAG3, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-204ENST00000371725 MRPL40Q9NQ50 206 aaKnown RBP28.26■■■□□ 2.11
SDCCAG3-204ENST00000371725 PRRC2BQ5JSZ5 2229 aaKnown RBP28.26■■■□□ 2.11
SDCCAG3-204ENST00000371725 RFXAPO00287 272 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 TRIM38O00635 465 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 VAPBO95292 243 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 CLPTM1O96005 669 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 ARNTP27540 789 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 KPNA2P52292 529 aaKnown RBP28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 MPP1Q00013 466 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 RANBP10Q6VN20 620 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 CHSY3Q70JA7 882 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 SPATA24Q86W54 205 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 DENND6AQ8IWF6 608 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 PPP1R2P1Q96PQ5 205 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 PKP2Q99959 881 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 MRPS26Q9BYN8 205 aaKnown RBP28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 UBA2Q9UBT2 640 aaPredicted RBP28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 XIRP2A4UGR9 3374 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 TNFAIP8O95379 198 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 CSKP41240 450 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 NRIP1P48552 1158 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 CTBP1Q13363 440 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 PRSS36Q5K4E3 855 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 CCNYL1Q8N7R7 359 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 TMEM102Q8N9M5 508 aaPredicted RBP28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 PPHLN1Q8NEY8 458 aaKnown RBP28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 FAR2Q96K12 515 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 NDNQ99608 321 aa28.25■■■□□ 2.11
SDCCAG3-204ENST00000371725 CD160O95971 181 aa28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 CEBPBP17676 345 aa28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 ATP5F1P24539 256 aaPredicted RBP28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 TNK2Q07912 1038 aa28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 ESRP1Q6NXG1 681 aaKnown RBP28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 C2CD4AQ8NCU7 369 aaPredicted RBP28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 PRKD2Q9BZL6 878 aa28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 TCAF1Q9Y4C2 921 aa28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 H0YJX3 145 aa28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 HOXA9P31269 272 aa28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 MSX2P35548 267 aaPredicted RBP28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 POU4F1Q01851 419 aa28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 CDH18Q13634 790 aa28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 COL13A1Q5TAT6 717 aaPredicted RBP28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 TXNDC5Q8NBS9 432 aaKnown RBP28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 VN1R2Q8NFZ6 395 aa28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 KLHL32Q96NJ5 620 aa28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 FEM1AQ9BSK4 669 aa28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 MRPL1Q9BYD6 325 aaKnown RBP28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 POLR1EQ9GZS1 481 aaKnown RBP28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 RETREG1Q9H6L5 497 aa28.24■■■□□ 2.11
SDCCAG3-204ENST00000371725 STX16-NPEPL1H3BU86 382 aa28.23■■■□□ 2.11
SDCCAG3-204ENST00000371725 XYLBO75191 536 aa28.23■■■□□ 2.11
SDCCAG3-204ENST00000371725 PGM3O95394 542 aa28.23■■■□□ 2.11
SDCCAG3-204ENST00000371725 ETS2P15036 469 aa28.23■■■□□ 2.11
SDCCAG3-204ENST00000371725 TMC5Q6UXY8 1006 aa28.23■■■□□ 2.11
SDCCAG3-204ENST00000371725 TRIM67Q6ZTA4 783 aa28.23■■■□□ 2.11
SDCCAG3-204ENST00000371725 APCDD1Q8J025 514 aa28.23■■■□□ 2.11
SDCCAG3-204ENST00000371725 ITFG1Q8TB96 612 aa28.23■■■□□ 2.11
SDCCAG3-204ENST00000371725 ASB9Q96DX5 294 aa28.23■■■□□ 2.11
SDCCAG3-204ENST00000371725 SAMD11Q96NU1 681 aa28.23■■■□□ 2.11
SDCCAG3-204ENST00000371725 NPAS2Q99743 824 aa28.23■■■□□ 2.11
SDCCAG3-204ENST00000371725 TREX1Q9NSU2 369 aa28.23■■■□□ 2.11
SDCCAG3-204ENST00000371725 SARDHQ9UL12 918 aa28.23■■■□□ 2.11
SDCCAG3-204ENST00000371725 OR6B1O95007 311 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 HNRNPA1P09651 372 aaKnown RBP eCLIP28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 RPS6KA3P51812 740 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 TAS2R39P59534 338 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 MAP7Q14244 749 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 ZNF460Q14592 562 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 CYTH1Q15438 398 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 ARMC3Q5W041 872 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 PPP2R2DQ66LE6 453 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 MARK4Q96L34 752 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 ZNF599Q96NL3 588 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 PTTG2Q9NZH5 202 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 EPS15L1Q9UBC2 864 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 SUCOQ9UBS9 1254 aaKnown RBP28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 OR51B4Q9Y5P0 310 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 TYW5A2RUC4 315 aaKnown RBP28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 VILLO15195 856 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 SLC1A2P43004 574 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 CD151P48509 253 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 STX5Q13190 355 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 PTK2BQ14289 1009 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 HEXDCQ8WVB3 486 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 TADA1Q96BN2 335 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 ALG14Q96F25 216 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 OMDQ99983 421 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 CINPQ9BW66 212 aaPredicted RBP28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 PADI4Q9UM07 663 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 PCDHGA7Q9Y5G6 932 aa28.22■■■□□ 2.11
SDCCAG3-204ENST00000371725 PAMP19021 973 aa28.21■■■□□ 2.11
SDCCAG3-204ENST00000371725 PSME3P61289 254 aa28.21■■■□□ 2.11
SDCCAG3-204ENST00000371725 MYBPC1Q00872 1141 aa28.21■■■□□ 2.11
SDCCAG3-204ENST00000371725 BIRC2Q13490 618 aa28.21■■■□□ 2.11
SDCCAG3-204ENST00000371725 KIAA0930Q6ICG6 404 aaPredicted RBP28.21■■■□□ 2.11
SDCCAG3-204ENST00000371725 RNF148Q8N7C7 305 aa28.21■■■□□ 2.11
SDCCAG3-204ENST00000371725 ST13P5Q8NFI4 369 aaPredicted RBP28.21■■■□□ 2.11
SDCCAG3-204ENST00000371725 CCDC126Q96EE4 140 aa28.21■■■□□ 2.11
SDCCAG3-204ENST00000371725 ELMO2Q96JJ3 720 aa28.21■■■□□ 2.11
SDCCAG3-204ENST00000371725 APOL5Q9BWW9 433 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms