RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 HDAC2Q92769 488 aaKnown RBP12.41□□□□□ -0.42
HCFC1-202ENST00000369984 HDAC10Q969S8 669 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 RNF157Q96PX1 679 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 MRPL17Q9NRX2 175 aaKnown RBP12.41□□□□□ -0.42
HCFC1-202ENST00000369984 TCRBV9S1A1TA0A576 114 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 TRBC1P01850 177 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 POLR2JP52435 117 aaKnown RBP12.41□□□□□ -0.42
HCFC1-202ENST00000369984 TUBA4AP68366 448 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 SEC23AQ15436 765 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 LDLRAP1Q5SW96 308 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 PPP1R26Q5T8A7 1209 aaPredicted RBP12.41□□□□□ -0.42
HCFC1-202ENST00000369984 RBFAQ8N0V3 343 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 OR10G6Q8NH81 332 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 EBNA1BP2Q99848 306 aaKnown RBP12.41□□□□□ -0.42
HCFC1-202ENST00000369984 ZNF350Q9GZX5 532 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 NKIRAS2Q9NYR9 191 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 MRTO4Q9UKD2 239 aaKnown RBP12.41□□□□□ -0.42
HCFC1-202ENST00000369984 PIK3C2BO00750 1634 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 SLC9A3R1O14745 358 aaPredicted RBP12.41□□□□□ -0.42
HCFC1-202ENST00000369984 RGL2O15211 777 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 CTPS1P17812 591 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 GK5Q6ZS86 529 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 OR2T34Q8NGX1 318 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 OR2T3Q8NH03 318 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 AKAP1Q92667 903 aaKnown RBP eCLIP12.41□□□□□ -0.425e-7■■■■□ 22.5
HCFC1-202ENST00000369984 S100PBPQ96BU1 408 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 S100A14Q9HCY8 104 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 AASDHPPTQ9NRN7 309 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 H3BM21 787 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 GNRH1P01148 92 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 CHSY3Q70JA7 882 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 CIB1Q99828 191 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 SNRNP25Q9BV90 132 aaKnown RBP12.41□□□□□ -0.42
HCFC1-202ENST00000369984 TIMM8BQ9Y5J9 83 aaPredicted RBP12.41□□□□□ -0.42
HCFC1-202ENST00000369984 NCANO14594 1321 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 ZNF208O43345 1280 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 CCNE2O96020 404 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 TSHRP16473 764 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 HOXC12P31275 282 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 E2F2Q14209 437 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 NTRK3Q16288 839 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 HECTD3Q5T447 861 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 NIPA1Q7RTP0 329 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 ARMC10Q8N2F6 343 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 OR2L3Q8NG85 312 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 UCKL1Q9NWZ5 548 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 DEPDC5O75140 1603 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 SLC30A4O14863 429 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 RPL22P35268 128 aaKnown RBP12.41□□□□□ -0.42
HCFC1-202ENST00000369984 MAXP61244 160 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 MADCAM1Q13477 382 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 CLIP4Q8N3C7 705 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 UBR7Q8N806 425 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 TESCQ96BS2 214 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 DNAJC11Q9NVH1 559 aa12.41□□□□□ -0.42
HCFC1-202ENST00000369984 PAPSS1O43252 624 aaPredicted RBP12.4□□□□□ -0.42
HCFC1-202ENST00000369984 LYPLA1O75608 230 aaPredicted RBP12.4□□□□□ -0.42
HCFC1-202ENST00000369984 SLC25A14O95258 325 aaPredicted RBP12.4□□□□□ -0.42
HCFC1-202ENST00000369984 DPEP1P16444 411 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 AKT2P31751 481 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 OR10H5Q8NGA6 315 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 TP53INP1Q96A56 240 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 KCNS3Q9BQ31 491 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 PLEKHA1Q9HB21 404 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 PNPOQ9NVS9 261 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 ZNF446Q9NWS9 450 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 FADS3Q9Y5Q0 445 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 A0A075B6Q4 140 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 ISM1B1AKI9 464 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 MC4RP32245 332 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 ZNF697Q5TEC3 545 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 STOX2Q9P2F5 926 aaPredicted RBP12.4□□□□□ -0.42
HCFC1-202ENST00000369984 THEGLP0DJG4 465 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 TFPIP10646 304 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 HTR1BP28222 390 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 PSEN1P49768 467 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 NRG1Q02297 640 aaPredicted RBP12.4□□□□□ -0.42
HCFC1-202ENST00000369984 USP41Q3LFD5 358 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 TMPRSS11BQ86T26 416 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 METTL3Q86U44 580 aaKnown RBP12.4□□□□□ -0.42
HCFC1-202ENST00000369984 LRRN4Q8WUT4 740 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 ERMAPQ96PL5 475 aaPredicted RBP12.4□□□□□ -0.42
HCFC1-202ENST00000369984 PORCNQ9H237 461 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 XKR8Q9H6D3 395 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 IKZF2Q9UKS7 526 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 TRPV2Q9Y5S1 764 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 SLC35G4P0C7Q5 338 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 OR2T12Q8NG77 320 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 SLC35C1Q96A29 364 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 C3orf14Q9HBI5 128 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 UPB1Q9UBR1 384 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 CHD2O14647 1828 aaKnown RBP12.4□□□□□ -0.42
HCFC1-202ENST00000369984 PRR5-ARHGAP8B1AHC4 643 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 FGBP02675 491 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 ARHGAP8P85298 464 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 LIPEQ05469 1076 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 FSTL1Q12841 308 aa12.4□□□□□ -0.42
HCFC1-202ENST00000369984 CBX2Q14781 532 aaPredicted RBP12.4□□□□□ -0.42
HCFC1-202ENST00000369984 RALGPS2Q86X27 583 aaPredicted RBP12.4□□□□□ -0.42
HCFC1-202ENST00000369984 FAM71AQ8IYT1 594 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms