RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 RIMKLAQ8IXN7 391 aa17.36■□□□□ 0.37
CHTOP-203ENST00000368690 NDRG1Q92597 394 aaKnown RBP17.36■□□□□ 0.37
CHTOP-203ENST00000368690 MUL1Q969V5 352 aa17.36■□□□□ 0.37
CHTOP-203ENST00000368690 PHF21BQ96EK2 531 aa17.36■□□□□ 0.37
CHTOP-203ENST00000368690 TNIP3Q96KP6 325 aa17.36■□□□□ 0.37
CHTOP-203ENST00000368690 ERVK-6Q9BXR3 956 aa17.36■□□□□ 0.37
CHTOP-203ENST00000368690 ENTPD7Q9NQZ7 604 aa17.36■□□□□ 0.37
CHTOP-203ENST00000368690 GDAP2Q9NXN4 497 aa17.36■□□□□ 0.37
CHTOP-203ENST00000368690 A0A1W2PP18 115 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 TULP3O75386 442 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 SUPT7LO94864 414 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 NTRK1P04629 796 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 PTPN2P17706 415 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 LBPP18428 481 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 SHMT2P34897 504 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 ADRA1AP35348 466 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 GEMP55040 296 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 CAPRIN1Q14444 709 aaKnown RBP17.35■□□□□ 0.37
CHTOP-203ENST00000368690 PHKG1Q16816 387 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 ARL13BQ3SXY8 428 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 C9orf57Q5W0N0 161 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 TTC23Q5W5X9 447 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 CRTC3Q6UUV7 619 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 SLC16A12Q6ZSM3 486 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 RPS27LQ71UM5 84 aaKnown RBP17.35■□□□□ 0.37
CHTOP-203ENST00000368690 OTOP3Q7RTS5 596 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 LIMS2Q7Z4I7 341 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 FAM35AQ86V20 835 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 PPP1R13LQ8WUF5 828 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 FUNDC2Q9BWH2 189 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 ANKMY1Q9P2S6 941 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 DNAJC15Q9Y5T4 150 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 OAS3Q9Y6K5 1087 aaKnown RBP17.35■□□□□ 0.37
CHTOP-203ENST00000368690 HCRTO43612 131 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 KCNH1O95259 989 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 NPPAP01160 153 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 THRBP10828 461 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 MTHFD1P11586 935 aaKnown RBP17.35■□□□□ 0.37
CHTOP-203ENST00000368690 ITIH1P19827 911 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 LIPEQ05469 1076 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 CD300CQ08708 224 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 SPCS2Q15005 226 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 RBM20Q5T481 1227 aaKnown RBP17.35■□□□□ 0.37
CHTOP-203ENST00000368690 C8orf59Q8N0T1 100 aaPredicted RBP17.35■□□□□ 0.37
CHTOP-203ENST00000368690 ZMAT2Q96NC0 199 aaKnown RBP17.35■□□□□ 0.37
CHTOP-203ENST00000368690 PPP1R16BQ96T49 567 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 CTRCQ99895 268 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 CHID1Q9BWS9 393 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 AP5M1Q9H0R1 490 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 SOX17Q9H6I2 414 aaPredicted RBP17.35■□□□□ 0.37
CHTOP-203ENST00000368690 TMEM45AQ9NWC5 275 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 NAALAD2Q9Y3Q0 740 aa17.35■□□□□ 0.37
CHTOP-203ENST00000368690 MYLKQ15746 1914 aa17.34■□□□□ 0.37
CHTOP-203ENST00000368690 DEAF1O75398 565 aaPredicted RBP17.34■□□□□ 0.37
CHTOP-203ENST00000368690 ALPLP05186 524 aa17.34■□□□□ 0.37
CHTOP-203ENST00000368690 CDH1P12830 882 aa17.34■□□□□ 0.37
CHTOP-203ENST00000368690 CCNCP24863 283 aa17.34■□□□□ 0.37
CHTOP-203ENST00000368690 LMO2P25791 158 aa17.34■□□□□ 0.37
CHTOP-203ENST00000368690 TKTP29401 623 aaKnown RBP17.34■□□□□ 0.37
CHTOP-203ENST00000368690 BRCA2P51587 3418 aa17.34■□□□□ 0.37
CHTOP-203ENST00000368690 PLK1P53350 603 aa17.34■□□□□ 0.37
CHTOP-203ENST00000368690 MAPK10P53779 464 aa17.34■□□□□ 0.37
CHTOP-203ENST00000368690 AQP6Q13520 282 aa17.34■□□□□ 0.37
CHTOP-203ENST00000368690 KANK2Q63ZY3 851 aa17.34■□□□□ 0.37
CHTOP-203ENST00000368690 SLC2A7Q6PXP3 512 aa17.34■□□□□ 0.37
CHTOP-203ENST00000368690 TBPL2Q6SJ96 375 aa17.34■□□□□ 0.37
CHTOP-203ENST00000368690 R3HCC1LQ7Z5L2 792 aaKnown RBP17.34■□□□□ 0.37
CHTOP-203ENST00000368690 REM2Q8IYK8 340 aaPredicted RBP17.34■□□□□ 0.37
CHTOP-203ENST00000368690 TRIB2Q92519 343 aa17.34■□□□□ 0.37
CHTOP-203ENST00000368690 NUP205Q92621 2012 aa17.34■□□□□ 0.37
CHTOP-203ENST00000368690 RMND5AQ9H871 391 aa17.34■□□□□ 0.37
CHTOP-203ENST00000368690 FBXO8Q9NRD0 319 aa17.34■□□□□ 0.37
CHTOP-203ENST00000368690 SLC2A6Q9UGQ3 507 aa17.34■□□□□ 0.37
CHTOP-203ENST00000368690 I6L893 689 aaPredicted RBP17.33■□□□□ 0.37
CHTOP-203ENST00000368690 MGEA5O60502 916 aa17.33■□□□□ 0.37
CHTOP-203ENST00000368690 EEDO75530 441 aaKnown RBP17.33■□□□□ 0.37
CHTOP-203ENST00000368690 MT-CO1P00395 513 aa17.33■□□□□ 0.37
CHTOP-203ENST00000368690 RAD23AP54725 363 aa17.33■□□□□ 0.37
CHTOP-203ENST00000368690 BEX3Q00994 111 aa17.33■□□□□ 0.37
CHTOP-203ENST00000368690 NFYCQ13952 458 aa17.33■□□□□ 0.37
CHTOP-203ENST00000368690 FBXO47Q5MNV8 452 aa17.33■□□□□ 0.37
CHTOP-203ENST00000368690 MFSD14CQ5VZR4 134 aa17.33■□□□□ 0.37
CHTOP-203ENST00000368690 ZNF280DQ6N043 979 aa17.33■□□□□ 0.37
CHTOP-203ENST00000368690 SPATA19Q7Z5L4 167 aa17.33■□□□□ 0.37
CHTOP-203ENST00000368690 RNF135Q8IUD6 432 aa17.33■□□□□ 0.37
CHTOP-203ENST00000368690 TWIST2Q8WVJ9 160 aa17.33■□□□□ 0.37
CHTOP-203ENST00000368690 BIRC7Q96CA5 298 aa17.33■□□□□ 0.37
CHTOP-203ENST00000368690 NTN4Q9HB63 628 aa17.33■□□□□ 0.37
CHTOP-203ENST00000368690 ERVK-11Q9UQG0 969 aa17.33■□□□□ 0.37
CHTOP-203ENST00000368690 DNAH12Q6ZR08 3092 aa17.33■□□□□ 0.37
CHTOP-203ENST00000368690 HTTP42858 3142 aa17.33■□□□□ 0.36
CHTOP-203ENST00000368690 GRXCR2A6NFK2 248 aa17.33■□□□□ 0.36
CHTOP-203ENST00000368690 UPK1AO00322 258 aa17.33■□□□□ 0.36
CHTOP-203ENST00000368690 AZIN1O14977 448 aa17.33■□□□□ 0.36
CHTOP-203ENST00000368690 B4GAT1O43505 415 aa17.33■□□□□ 0.36
CHTOP-203ENST00000368690 RSL1D1O76021 490 aaKnown RBP17.33■□□□□ 0.36
CHTOP-203ENST00000368690 NPR3P17342 541 aa17.33■□□□□ 0.36
CHTOP-203ENST00000368690 GSSP48637 474 aa17.33■□□□□ 0.36
CHTOP-203ENST00000368690 VEGFBP49765 207 aa17.33■□□□□ 0.36
CHTOP-203ENST00000368690 SH3BP2P78314 561 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms