RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 CTBP1Q13363 440 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 PEX6Q13608 980 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 TSGA10IPQ3SY00 556 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 TBCELQ5QJ74 424 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 PRMT9Q6P2P2 845 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 ZNF611Q8N823 705 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 C3orf20Q8ND61 904 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 FAIM2Q9BWQ8 316 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 SLC35C2Q9NQQ7 365 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 ADPRHL2Q9NX46 363 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 RRN3Q9NYV6 651 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 HCN3Q9P1Z3 774 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 ZNF214Q9UL59 606 aaPredicted RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 ZDHHC9Q9Y397 364 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 LRRC72A6NJI9 287 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 SLC33A1O00400 549 aaPredicted RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 FGF10O15520 208 aaPredicted RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 MAFO75444 373 aaPredicted RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 MAPTP10636 758 aaKnown RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 PSMB9P28065 219 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 RPL22P35268 128 aaKnown RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 MAGEA8P43361 318 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 NRLP54845 237 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 MTA1Q13330 715 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 CPSF6Q16630 551 aaKnown RBP eCLIP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 WDR93Q6P2C0 686 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 TC2NQ8N9U0 490 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 KBTBD7Q8WVZ9 684 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 KAT5Q92993 513 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 ERMAPQ96PL5 475 aaPredicted RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 ETNK2Q9NVF9 386 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 TAS2R14Q9NYV8 317 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 COPS7AQ9UBW8 275 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 ABCG2Q9UNQ0 655 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 MAGEB16A2A368 324 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 FAM172BPA6NC97 362 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 SPATA31C2B4DYI2 1134 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 SERPINA3P01011 423 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 PDX1P52945 283 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 SLC5A3P53794 718 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 TLE2Q04725 743 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 ACSM2AQ08AH3 577 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 MAPK7Q13164 816 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 ACSM2BQ68CK6 577 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 BNC2Q6ZN30 1099 aaPredicted RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 GALNTL5Q7Z4T8 443 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 MTDHQ86UE4 582 aaKnown RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 VSIG10LQ86VR7 867 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 RP9Q8TA86 221 aaKnown RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 DNASE1L2Q92874 299 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 KCNF1Q9H3M0 494 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 VPS4AQ9UN37 437 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 NDUFAF1Q9Y375 327 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 PTCH2Q9Y6C5 1203 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 ADAMTS13Q76LX8 1427 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 KHNYNO15037 678 aaKnown RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 OR1F1O43749 312 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 TSPAN1O60635 241 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 PEX11AO75192 247 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 INMTO95050 263 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 TSPAN19P0C672 248 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 ZCCHC18P0CG32 403 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 H2AFXP16104 143 aaPredicted RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 ZNF268Q14587 947 aaPredicted RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 MSANTD2Q6P1R3 559 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 KLHL35Q6PF15 583 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 AFTPHQ6ULP2 937 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 AKAP14Q86UN6 197 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 LHFPL3Q86UP9 236 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 PSTKQ8IV42 348 aaKnown RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 REXO1L1PQ8IX06 675 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 FAM126BQ8IXS8 530 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 DAW1Q8N136 415 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 TEX19Q8NA77 164 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 SMYD1Q8NB12 490 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 OR52L1Q8NGH7 329 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 TESCQ96BS2 214 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 DNAJA3Q96EY1 480 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 Q96MT0 163 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 CDC42EP4Q9H3Q1 356 aaKnown RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 PHPT1Q9NRX4 125 aaPredicted RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 SSX4O60224 188 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 FKBP6O75344 327 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 PRH1P02810 166 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 ERBB2P04626 1255 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 RPL38P63173 70 aaKnown RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 SULT2A1Q06520 285 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 FAM110CQ1W6H9 321 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 POP5Q969H6 163 aaKnown RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 MED11Q9P086 117 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 WHRNQ9P202 907 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 IL36AQ9UHA7 158 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 PCDHA3Q9Y5H8 950 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 MAGEB3O15480 346 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 NUAK1O60285 661 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 SERPINA1P01009 418 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 ZNF12P17014 697 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 MAD2L1Q13257 205 aaPredicted RBP7.04□□□□□ -1.28
SPTA1-201ENST00000368147 RASA2Q15283 850 aa7.04□□□□□ -1.28
SPTA1-201ENST00000368147 HGSNATQ68CP4 663 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms