RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 SMARCB1Q12824 385 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 MRPL58Q14197 206 aaKnown RBP14.22□□□□□ -0.13
CD48-201ENST00000368045 GALNT3Q14435 633 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 CYTH1Q15438 398 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 TAF1AQ15573 450 aaPredicted RBP14.22□□□□□ -0.13
CD48-201ENST00000368045 CTXN3Q4LDR2 81 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 SLC24A5Q71RS6 500 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 IFNL1Q8IU54 200 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 LRRC58Q96CX6 371 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 MYRFLQ96LU7 910 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 SLC39A3Q9BRY0 314 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 C9orf16Q9BUW7 83 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 SLC52A3Q9NQ40 469 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 OLAHQ9NV23 265 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 DUS2Q9NX74 493 aaKnown RBP14.22□□□□□ -0.13
CD48-201ENST00000368045 CMTM6Q9NX76 183 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 GPR45Q9Y5Y3 372 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 OAS3Q9Y6K5 1087 aaKnown RBP14.22□□□□□ -0.13
CD48-201ENST00000368045 AK5Q9Y6K8 562 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 MIA3Q5JRA6 1907 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 A0A1W2PP18 115 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 GRXCR2A6NFK2 248 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 TRIM64CA6NLI5 447 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 F5H5T6 163 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 UROSP10746 265 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 CDH2P19022 906 aaPredicted RBP14.22□□□□□ -0.13
CD48-201ENST00000368045 FASP25445 335 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 FOXA1P55317 472 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 KCNA10Q16322 511 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 CLLU1OSQ5K130 101 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 CIR1Q86X95 450 aaPredicted RBP14.22□□□□□ -0.13
CD48-201ENST00000368045 PTRH1Q86Y79 214 aaKnown RBP14.22□□□□□ -0.13
CD48-201ENST00000368045 MYO1HQ8N1T3 1032 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 KLHDC9Q8NEP7 349 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 CENPNQ96H22 339 aaPredicted RBP14.22□□□□□ -0.13
CD48-201ENST00000368045 NSUN5Q96P11 429 aaKnown RBP14.22□□□□□ -0.13
CD48-201ENST00000368045 PSKH2Q96QS6 385 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 CDK5RAP1Q96SZ6 601 aaKnown RBP14.22□□□□□ -0.13
CD48-201ENST00000368045 BRINP2Q9C0B6 783 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 AIG1Q9NVV5 245 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 NOD1Q9Y239 953 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 PCDHA9Q9Y5H5 950 aa14.22□□□□□ -0.13
CD48-201ENST00000368045 DOCK4Q8N1I0 1966 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 LRRC14BA6NHZ5 514 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 C2orf81A6NN90 581 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 PPP6CO00743 305 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 SOCS2O14508 198 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 NDUFS3O75489 264 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 ECI2O75521 394 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 ESRRBO95718 433 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 NPPAP01160 153 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 CYBBP04839 570 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 ZDHHC11BP0C7U3 371 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 LINC00032P0C843 101 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 UMPSP11172 480 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 HOXD9P28356 352 aaPredicted RBP14.21□□□□□ -0.13
CD48-201ENST00000368045 CDK9P50750 372 aaKnown RBP14.21□□□□□ -0.13
CD48-201ENST00000368045 EEFSECP57772 596 aaKnown RBP14.21□□□□□ -0.13
CD48-201ENST00000368045 KCNK10P57789 538 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 TAF10Q12962 218 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 RCAN2Q14206 197 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 PDCD4Q53EL6 469 aaKnown RBP14.21□□□□□ -0.13
CD48-201ENST00000368045 XKR7Q5GH72 579 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 NADSYN1Q6IA69 706 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 PAQR3Q6TCH7 311 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 ADGRG5Q8IZF4 528 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 TRPV3Q8NET8 790 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 TRIB2Q92519 343 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 TMEM125Q96AQ2 219 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 FAM193BQ96PV7 902 aaPredicted RBP14.21□□□□□ -0.13
CD48-201ENST00000368045 CAAP1Q9H8G2 361 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 RSL24D1Q9UHA3 163 aaKnown RBP14.21□□□□□ -0.13
CD48-201ENST00000368045 LEF1Q9UJU2 399 aaPredicted RBP14.21□□□□□ -0.13
CD48-201ENST00000368045 PTGDR2Q9Y5Y4 395 aa14.21□□□□□ -0.13
CD48-201ENST00000368045 A0A087WXM4 84 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 MYOCOSA0A1B0GUC4 107 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 UBA6A0AVT1 1052 aaPredicted RBP14.2□□□□□ -0.14
CD48-201ENST00000368045 ARPC2O15144 300 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 VPS26AO75436 327 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 EEDO75530 441 aaKnown RBP14.2□□□□□ -0.14
CD48-201ENST00000368045 HMBSP08397 361 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 COL6A1P12109 1028 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 MYF6P23409 242 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 ZNF157P51786 506 aaPredicted RBP14.2□□□□□ -0.14
CD48-201ENST00000368045 GNA12Q03113 381 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 PTPRCAPQ14761 206 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 ATP6AP1Q15904 470 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 AASDHQ4L235 1098 aaPredicted RBP14.2□□□□□ -0.14
CD48-201ENST00000368045 SETMARQ53H47 684 aaPredicted RBP14.2□□□□□ -0.14
CD48-201ENST00000368045 PITRM1Q5JRX3 1037 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 TMTC4Q5T4D3 741 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 CCSAPQ6IQ19 270 aaPredicted RBP14.2□□□□□ -0.14
CD48-201ENST00000368045 ISLR2Q6UXK2 745 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 PRR23BQ6ZRT6 265 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 SPRED1Q7Z699 444 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 ERI1Q8IV48 349 aaKnown RBP14.2□□□□□ -0.14
CD48-201ENST00000368045 LGI2Q8N0V4 545 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 FIBCD1Q8N539 461 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 ATAD1Q8NBU5 361 aa14.2□□□□□ -0.14
CD48-201ENST00000368045 PAPD5Q8NDF8 572 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms