RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 TTYH3Q9C0H2 523 aa8.62□□□□□ -1.03
SYNE1-206ENST00000367253 GPRC5CQ9NQ84 441 aa8.62□□□□□ -1.03
SYNE1-206ENST00000367253 MRPL42Q9Y6G3 142 aaKnown RBP8.62□□□□□ -1.03
SYNE1-206ENST00000367253 PDPK1O15530 556 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 RAD51CO43502 376 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 MAP3K6O95382 1288 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 PRKCAP17252 672 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 SLC29A2Q14542 456 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 SNRNP35Q16560 246 aaKnown RBP8.61□□□□□ -1.03
SYNE1-206ENST00000367253 NDUFAF6Q330K2 333 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 AADACL4Q5VUY2 407 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 KANK2Q63ZY3 851 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 C3orf62Q6ZUJ4 267 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 OTOAQ7RTW8 1153 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 EPHX4Q8IUS5 362 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 GRAMD2AQ8IUY3 354 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 CENPLQ8N0S6 344 aaPredicted RBP8.61□□□□□ -1.03
SYNE1-206ENST00000367253 TRPV1Q8NER1 839 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 LPCAT1Q8NF37 534 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 PPTC7Q8NI37 304 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 BCL7CQ8WUZ0 217 aaPredicted RBP8.61□□□□□ -1.03
SYNE1-206ENST00000367253 FUT8Q9BYC5 575 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 RNF121Q9H920 327 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 CRNNQ9UBG3 495 aaPredicted RBP8.61□□□□□ -1.03
SYNE1-206ENST00000367253 XPO7Q9UIA9 1087 aaKnown RBP8.61□□□□□ -1.03
SYNE1-206ENST00000367253 RGPD1P0DJD0 1748 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 TRPM3Q9HCF6 1732 aaPredicted RBP8.61□□□□□ -1.03
SYNE1-206ENST00000367253 TBL1XO60907 577 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 TFPIP10646 304 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 STOMP27105 288 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 IL12AP29459 219 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 CHI3L1P36222 383 aaPredicted RBP8.61□□□□□ -1.03
SYNE1-206ENST00000367253 TGFBR2P37173 567 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 WASP42768 502 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 OVGP1Q12889 678 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 MTF1Q14872 753 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 TARBP2Q15633 366 aaKnown RBP8.61□□□□□ -1.03
SYNE1-206ENST00000367253 CDC73Q6P1J9 531 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 FUT10Q6P4F1 479 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 CHST9Q7L1S5 443 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 PIGWQ7Z7B1 504 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 ZSCAN4Q8NAM6 433 aaPredicted RBP8.61□□□□□ -1.03
SYNE1-206ENST00000367253 STK32AQ8WU08 396 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 NDC1Q9BTX1 674 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 TAPBPLQ9BX59 468 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 PRDM12Q9H4Q4 367 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 RMND5AQ9H871 391 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 SDHAF3Q9NRP4 125 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 ASH2LQ9UBL3 628 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 MRC1P22897 1456 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 GNG14A0A1W2PPG7 69 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 DLL1O00548 723 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 CBSLP0DN79 551 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 NR2C1P13056 603 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 CBSP35520 551 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 PRCPP42785 496 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 RRADP55042 308 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 NRG3P56975 720 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 CCZ1BP86790 482 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 CCZ1P86791 482 aaPredicted RBP8.61□□□□□ -1.03
SYNE1-206ENST00000367253 E2F1Q01094 437 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 DDR1Q08345 913 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 NECTIN1Q15223 517 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 TBCELQ5QJ74 424 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 ZFP1Q6P2D0 407 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 ZPBP2Q6X784 338 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 MOB2Q70IA6 237 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 ZNF589Q86UQ0 364 aaPredicted RBP8.61□□□□□ -1.03
SYNE1-206ENST00000367253 C4orf19Q8IY42 314 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 S100ZQ8WXG8 99 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 MS4A14Q96JA4 679 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 BDH2Q9BUT1 245 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 GANQ9H2C0 597 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 RAB6BQ9NRW1 208 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 ADAM28Q9UKQ2 775 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 SNX8Q9Y5X2 465 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 DNMT3AQ9Y6K1 912 aaPredicted RBP8.61□□□□□ -1.03
SYNE1-206ENST00000367253 OXSR1O95747 527 aaPredicted RBP8.61□□□□□ -1.03
SYNE1-206ENST00000367253 CYB5AP00167 134 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 SERPINA3P01011 423 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 CHRM5P08912 532 aaPredicted RBP8.61□□□□□ -1.03
SYNE1-206ENST00000367253 HSD17B3P37058 310 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 ID4P47928 161 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 TTMPQ5BVD1 217 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 RNF220Q5VTB9 566 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 METTL21CQ5VZV1 264 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 LYSMD4Q5XG99 296 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 EIF3MQ7L2H7 374 aaKnown RBP8.61□□□□□ -1.03
SYNE1-206ENST00000367253 PEG10Q86TG7 708 aaKnown RBP8.61□□□□□ -1.03
SYNE1-206ENST00000367253 TMPRSS6Q8IU80 811 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 GJD3Q8N144 294 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 SEC14L1Q92503 715 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 CENPIQ92674 756 aaPredicted RBP8.61□□□□□ -1.03
SYNE1-206ENST00000367253 MR1Q95460 341 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 SLC22A18Q96BI1 424 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 CDC6Q99741 560 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 GRIP2Q9C0E4 1043 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 SAP130Q9H0E3 1048 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 RACGAP1Q9H0H5 632 aa8.61□□□□□ -1.03
SYNE1-206ENST00000367253 OSBPL2Q9H1P3 480 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms