RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 GCAP28676 217 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 TWF1Q12792 350 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 IL18R1Q13478 541 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 ARHGEF7Q14155 803 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 FAAH2Q6GMR7 532 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 SATL1Q86VE3 508 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 TBC1D21Q8IYX1 336 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 ZNF570Q96NI8 536 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 SEPHS2Q99611 448 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 POPDC3Q9HBV1 291 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 PGAP2Q9UHJ9 254 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 A0A0G2JPF8 293 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 HNRNPCL3B7ZW38 293 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 HNRNPCL4P0DMR1 293 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 CXCR3P49682 368 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 ACLYP53396 1101 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 NME5P56597 212 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 SCAPQ12770 1279 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 CTBP1Q13363 440 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 RFTN1Q14699 578 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 TIMM50Q3ZCQ8 353 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 NOMO2Q5JPE7 1267 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 TLDC1Q6P9B6 456 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 MILR1Q7Z6M3 343 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 TAC4Q86UU9 113 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 METTL6Q8TCB7 284 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 STON2Q8WXE9 905 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 DPY30Q9C005 99 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 EME2A4GXA9 379 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 E9PAM4 449 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 DBTP11182 482 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 RHOAP61586 193 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 LSM3P62310 102 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 IGDCC3Q8IVU1 814 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 ZHX1-C8orf76Q96EF9 292 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 C16orf70Q9BSU1 422 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 AFF4Q9UHB7 1163 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 MAGEL2Q9UJ55 1249 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 DNMT3LQ9UJW3 386 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 ABT1Q9ULW3 272 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 THSD7AQ9UPZ6 1657 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 A0A1W2PQ67 120 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 SYNCRIPO60506 623 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 CD86P42081 329 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 STAT5AP42229 794 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 TPTEP56180 551 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 PWP1Q13610 501 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 DGCR6Q14129 220 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 CARTPTQ16568 116 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 TAPT1Q6NXT6 567 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 ZBTB46Q86UZ6 589 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 GPSM1Q86YR5 675 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 MIB1Q86YT6 1006 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 PYROXD2Q8N2H3 581 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 CAMKK1Q8N5S9 505 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 LSM14AQ8ND56 463 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 PEX13Q92968 403 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 RNF38Q9H0F5 515 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 TFB2MQ9H5Q4 396 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 HPS4Q9NQG7 708 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 PCDHGA10Q9Y5H3 936 aa5.35□□□□□ -1.55
CDC42BPA-204ENST00000366767 SYN3O14994 580 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 KCNH1O95259 989 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 PABPC1P11940 636 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 NMBRP28336 390 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 PKNOX1P55347 436 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 WNT7BP56706 349 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 GAD2Q05329 585 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 ADGRE1Q14246 886 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 LPCAT4Q643R3 524 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 ESRP1Q6NXG1 681 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 OR8H3Q8N146 312 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 PACRGLQ8N7B6 248 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 TSPEARQ8WU66 669 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 C1orf74Q96LT6 269 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 ALG9Q9H6U8 611 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 ATP13A1Q9HD20 1204 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 LATS2Q9NRM7 1088 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 MARCH2Q9P0N8 246 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 NKX1-2Q9UD57 310 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 CDK5RAP2Q96SN8 1893 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 C2orf71A6NGG8 1288 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 AQP12BA6NM10 295 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 ITM2AO43736 263 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 BMP10O95393 424 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 FOXM1Q08050 763 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 PLD1Q13393 1074 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 HMBOX1Q6NT76 420 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 ANKS3Q6ZW76 656 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 ADAMTSL2Q86TH1 951 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 SAPCD2Q86UD0 394 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 ITIH5Q86UX2 942 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 AQP12AQ8IXF9 295 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 SCML4Q8N228 414 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 FNDC5Q8NAU1 212 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 RAET1EQ8TD07 263 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 FEM1CQ96JP0 617 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 RANBP9Q96S59 729 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 EBF4Q9BQW3 602 aa5.34□□□□□ -1.55
CDC42BPA-204ENST00000366767 PREBQ9HCU5 417 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms