RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 SLC24A3Q9HC58 644 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 NT5MQ9NPB1 228 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 SYBUQ9NX95 663 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 MOCS1Q9NZB8 636 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 SENP1Q9P0U3 644 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 SAMD15Q9P1V8 674 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 CTNNAL1Q9UBT7 734 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 SEPT3Q9UH03 358 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 ZNF180Q9UJW8 692 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 SCN8AQ9UQD0 1980 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 ITPR2Q14571 2701 aa11.26□□□□□ -0.61
CSNK1E-202ENST00000366216 FAM237BA0A1B0GVD1 139 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 TERTO14746 1132 aaKnown RBP11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 SHOX2O60902 331 aaPredicted RBP11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 DXOO77932 396 aaKnown RBP11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 USP1O94782 785 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 MT-CYBP00156 380 aaPredicted RBP11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 MPOP05164 745 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 IGHV4-34P06331 123 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 POLBP06746 335 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 HPDP32754 393 aaPredicted RBP11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 ARRB1P49407 418 aaPredicted RBP11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 ERVPABLB-1P60509 514 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 NIPAL4Q0D2K0 466 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 NFATC3Q12968 1075 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 NAB1Q13506 487 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 EIF4HQ15056 248 aaKnown RBP11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 TMED2Q15363 201 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 SKIDA1Q1XH10 827 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 KBTBD12Q3ZCT8 623 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 KIAA1614Q5VZ46 1190 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 CASC4Q6P4E1 433 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 RANBP10Q6VN20 620 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 PRPF39Q86UA1 669 aaKnown RBP11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 TMEM135Q86UB9 458 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 TRABD2AQ86V40 505 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 SLC26A11Q86WA9 606 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 LRRC6Q86X45 466 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 LSMEM2Q8N112 164 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 CYP4X1Q8N118 509 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 ARRDC2Q8TBH0 407 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 PTCD2Q8WV60 388 aaKnown RBP11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 DCAKDQ8WVC6 231 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 SKA1Q96BD8 255 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 MRGPRX2Q96LB1 330 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 SLC6A18Q96N87 628 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 PSKH2Q96QS6 385 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 CAPS2Q9BXY5 557 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 POLR1EQ9GZS1 481 aaKnown RBP11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 ARNT2Q9HBZ2 717 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 MRM3Q9HC36 420 aaKnown RBP11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 ATP13A1Q9HD20 1204 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 ELOVL2Q9NXB9 296 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 UBP1Q9NZI7 540 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 UBA2Q9UBT2 640 aaPredicted RBP11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 SOX13Q9UN79 622 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 PCDHB1Q9Y5F3 818 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 CENPEQ02224 2701 aa11.25□□□□□ -0.61
CSNK1E-202ENST00000366216 ANKRD17O75179 2603 aaKnown RBP11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 CACNA1DQ01668 2161 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 ICE1Q9Y2F5 2266 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 CXorf51AA0A1B0GTR3 108 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 K7ENP7 123 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 USP12O75317 370 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 FAM155BO75949 473 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 MT-CO3P00414 261 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 MMP2P08253 660 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 INHBAP08476 426 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 CES1P23141 567 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 ACP1P24666 158 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 EPHA8P29322 1005 aaPredicted RBP11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 MDH1P40925 334 aaKnown RBP11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 ATP1A2P50993 1020 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 WNT3AP56704 352 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 GABREP78334 506 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 E2F1Q01094 437 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 OLIG2Q13516 323 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 ZNF235Q14590 738 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 CRYMQ14894 314 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 EFTUD2Q15029 972 aaKnown RBP eCLIP11.24□□□□□ -0.616e-7■■■□□ 15
CSNK1E-202ENST00000366216 INO80DQ53TQ3 878 aaPredicted RBP11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 PCID2Q5JVF3 399 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 C6orf132Q5T0Z8 1188 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 RNF219Q5W0B1 726 aaPredicted RBP11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 KIAA0895LQ68EN5 471 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 DENND5AQ6IQ26 1287 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 INO80CQ6PI98 192 aaPredicted RBP11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 ZNF574Q6ZN55 896 aaPredicted RBP11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 KANSL1Q7Z3B3 1105 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 PGBD5Q8N414 524 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 CARNMT1Q8N4J0 409 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 IPMKQ8NFU5 416 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 CENPTQ96BT3 561 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 ALG14Q96F25 216 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 MGME1Q9BQP7 344 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 SPON2Q9BUD6 331 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 FICDQ9BVA6 458 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 KIFC1Q9BW19 673 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 CIPCQ9C0C6 399 aa11.24□□□□□ -0.61
CSNK1E-202ENST00000366216 MUC3BQ9H195 1237 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms