RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 A0A1W2PQ45 241 aaPredicted RBP13.41□□□□□ -0.26
LDB3-202ENST00000361373 A0A1W2PQY0 241 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 PSMB9P28065 219 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 EPHA3P29320 983 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 CDH13P55290 713 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 ZNF33AQ06730 810 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 INCA1Q0VD86 236 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 CARD16Q5EG05 197 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 ZC3H7AQ8IWR0 971 aaKnown RBP13.41□□□□□ -0.26
LDB3-202ENST00000361373 DEPDC4Q8N2C3 294 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 DDHD1Q8NEL9 900 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 RAD51AP1Q96B01 352 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 TNKS2Q9H2K2 1166 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 CAB39LQ9H9S4 337 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 CD248Q9HCU0 757 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 NPEPPSL1A6NEC2 478 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 LINC00032P0C843 101 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 ZCCHC18P0CG32 403 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 ADSLP30566 484 aaPredicted RBP13.41□□□□□ -0.26
LDB3-202ENST00000361373 HNF4AP41235 474 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 JAG1P78504 1218 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 GPAT3Q53EU6 434 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 ERICH5Q6P6B1 374 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 ZYG11AQ6WRX3 759 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 MACC1Q6ZN28 852 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 WDR36Q8NI36 951 aaKnown RBP13.41□□□□□ -0.26
LDB3-202ENST00000361373 SCAMP5Q8TAC9 235 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 RAB11FIP5Q9BXF6 653 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 LRTM1Q9HBL6 345 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 HMGB3O15347 200 aaKnown RBP13.41□□□□□ -0.26
LDB3-202ENST00000361373 HSMCR30P0CW71 290 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 AKT2P31751 481 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 CCNFP41002 786 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 MRPS22P82650 360 aaKnown RBP13.41□□□□□ -0.26
LDB3-202ENST00000361373 LCP2Q13094 533 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 SERPINA9Q86WD7 417 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 C8orf59Q8N0T1 100 aaPredicted RBP13.41□□□□□ -0.26
LDB3-202ENST00000361373 SPATA22Q8NHS9 363 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 DNAJB14Q8TBM8 379 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 SAMD11Q96NU1 681 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 TEFMQ96QE5 360 aaKnown RBP13.41□□□□□ -0.26
LDB3-202ENST00000361373 MAGEL2Q9UJ55 1249 aa13.41□□□□□ -0.26
LDB3-202ENST00000361373 ADAMTSL3P82987 1691 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 SLC10A3P09131 477 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 ZNF24P17028 368 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 SLC6A2P23975 617 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 DLG2Q15700 870 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 ARMCX4Q5H9R4 360 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 TMEM192Q8IY95 271 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 CELF5Q8N6W0 485 aaKnown RBP13.4□□□□□ -0.26
LDB3-202ENST00000361373 SH3GL3Q99963 347 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 SMOC2Q9H3U7 446 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 CCDC177Q9NQR7 707 aaPredicted RBP13.4□□□□□ -0.26
LDB3-202ENST00000361373 FCF1Q9Y324 198 aaKnown RBP13.4□□□□□ -0.26
LDB3-202ENST00000361373 CCND3P30281 292 aaPredicted RBP13.4□□□□□ -0.26
LDB3-202ENST00000361373 HSD17B2P37059 387 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 GRIA3P42263 894 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 OVCA2Q8WZ82 227 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 GPN3Q9UHW5 284 aaPredicted RBP13.4□□□□□ -0.26
LDB3-202ENST00000361373 ATP6V1HQ9UI12 483 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 DLG5Q8TDM6 1919 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 TCRBV7S2A1N4TA0A589 114 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 FPGTO14772 594 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 LDLRAD1Q5T700 205 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 VN1R5Q7Z5H4 357 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 ZNF461Q8TAF7 563 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 MFSD3Q96ES6 412 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 KLHL32Q96NJ5 620 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 SLC38A2Q96QD8 506 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 ZNF184Q99676 751 aaPredicted RBP13.4□□□□□ -0.26
LDB3-202ENST00000361373 RNF39Q9H2S5 420 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 MUC13Q9H3R2 512 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 RNPEPL1Q9HAU8 725 aa13.4□□□□□ -0.26
LDB3-202ENST00000361373 FSHRP23945 695 aa13.4□□□□□ -0.27
LDB3-202ENST00000361373 MANFP55145 182 aaKnown RBP13.4□□□□□ -0.27
LDB3-202ENST00000361373 SLC35G1Q2M3R5 365 aa13.4□□□□□ -0.27
LDB3-202ENST00000361373 SPATA6LQ8N4H0 392 aa13.4□□□□□ -0.27
LDB3-202ENST00000361373 PHF10Q8WUB8 498 aaKnown RBP13.4□□□□□ -0.27
LDB3-202ENST00000361373 RTKNQ9BST9 563 aa13.4□□□□□ -0.27
LDB3-202ENST00000361373 C8orf4Q9NR00 106 aa13.4□□□□□ -0.27
LDB3-202ENST00000361373 ABCB8Q9NUT2 735 aa13.4□□□□□ -0.27
LDB3-202ENST00000361373 NRP2O60462 931 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 KIR3DL1P43629 444 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 USP4Q13107 963 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 ASTE1Q2TB18 679 aaPredicted RBP13.39□□□□□ -0.27
LDB3-202ENST00000361373 TTC27Q6P3X3 843 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 VITQ6UXI7 678 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 FGD2Q7Z6J4 655 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 SAMD14Q8IZD0 417 aaPredicted RBP13.39□□□□□ -0.27
LDB3-202ENST00000361373 FUKQ8N0W3 1084 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 ZSCAN18Q8TBC5 510 aaPredicted RBP13.39□□□□□ -0.27
LDB3-202ENST00000361373 SLC35F5Q8WV83 523 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 LMAN2LQ9H0V9 348 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 ZNF490Q9ULM2 529 aaPredicted RBP13.39□□□□□ -0.27
LDB3-202ENST00000361373 HNRNPCP07910 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
LDB3-202ENST00000361373 TSPAN8P19075 237 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 WASP42768 502 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 MLLT6P55198 1093 aaPredicted RBP13.39□□□□□ -0.27
LDB3-202ENST00000361373 SLC25A3Q00325 362 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 ECT2LQ008S8 904 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms