RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 NEU2Q9Y3R4 380 aa19.03■□□□□ 0.64
HLA-DRB1-201ENST00000360004 PCDHGB2Q9Y5G2 931 aa19.03■□□□□ 0.64
HLA-DRB1-201ENST00000360004 DMDP11532 3685 aa19.03■□□□□ 0.64
HLA-DRB1-201ENST00000360004 GVINP1Q7Z2Y8 2422 aa19.03■□□□□ 0.64
HLA-DRB1-201ENST00000360004 CACNA1EQ15878 2313 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 TCRBV7S3A2A0A539 114 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 PRSS38A1L453 326 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 FAM187AA6NFU0 413 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 EFCAB8A8MWE9 144 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 NDC80O14777 642 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 TNFRSF10CO14798 259 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 SLC30A4O14863 429 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 FFAR2O15552 330 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 LDB2O43679 373 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 PCDHGA12O60330 932 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 SOD1P00441 154 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 MGAT1P26572 445 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 AKT1P31749 480 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 GRK6P43250 576 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 GNPDA1P46926 289 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 HK3P52790 923 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 PRRT3Q5FWE3 981 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 ZRANB3Q5FWF4 1079 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 PCID2Q5JVF3 399 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 ANKRD22Q5VYY1 191 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 NAXDQ8IW45 347 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 ZNF398Q8TD17 642 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 RHBDD1Q8TEB9 315 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 OR1E3Q8WZA6 343 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 PDXPQ96GD0 296 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 RANBP9Q96S59 729 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 ZCCHC2Q9C0B9 1178 aaKnown RBP19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 ASB8Q9H765 288 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 FGF22Q9HCT0 170 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 ARFGAP3Q9NP61 516 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 MRPL40Q9NQ50 206 aaKnown RBP19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 NLE1Q9NVX2 485 aaPredicted RBP19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 TCAF1Q9Y4C2 921 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 GPSM3Q9Y4H4 160 aa19.02■□□□□ 0.64
HLA-DRB1-201ENST00000360004 CCL22O00626 93 aa19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 AQP9O43315 295 aa19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 PIAS2O75928 621 aa19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 SRP72O76094 671 aaKnown RBP19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 MC4RP32245 332 aa19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 MAGEA6P43360 314 aa19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 POLD2P49005 469 aa19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 PRAMEP78395 509 aa19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 C1orf61Q13536 156 aa19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 ELOCQ15369 112 aa19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 ATP13A5Q4VNC0 1218 aa19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 TAS2R42Q7RTR8 314 aa19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 GALNT13Q8IUC8 556 aa19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 FSTL5Q8N475 847 aaPredicted RBP19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 MCUQ8NE86 351 aa19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 ZNF548Q8NEK5 533 aaPredicted RBP19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 SNF8Q96H20 258 aa19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 RTKNQ9BST9 563 aa19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 FRMD8Q9BZ67 464 aaPredicted RBP19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 ZNHIT2Q9UHR6 403 aa19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 UTP11Q9Y3A2 253 aaKnown RBP19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 ZNF292O60281 2723 aa19.01■□□□□ 0.63
HLA-DRB1-201ENST00000360004 CTAGE15A4D2H0 777 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 SH3BP5O60239 455 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 UGT1A9O60656 530 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 TMEM63AO94886 807 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 ANXA6P08133 673 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 CTAGE8P0CG41 777 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 UGT1A6P19224 532 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 UGT1A1P22309 533 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 UGT1A4P22310 534 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 DGKAP23743 735 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 UGT1A3P35503 534 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 UGT1A5P35504 534 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 CRADDP78560 199 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 MRPS25P82663 173 aaKnown RBP19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 CALCOCO2Q13137 446 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 MSLNQ13421 630 aaPredicted RBP19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 SHBQ15464 509 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 LDLRAP1Q5SW96 308 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 TSTD2Q5T7W7 516 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 C8orf74Q6P047 294 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 CTAGE6Q86UF2 777 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 CTAGE4Q8IX94 777 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 EID2Q8N6I1 236 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 OTUD6BQ8N6M0 293 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 BBOF1Q8ND07 529 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 OR6P1Q8NGX9 317 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 SAP25Q8TEE9 199 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 SCG3Q8WXD2 468 aaKnown RBP19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 ULK4Q96C45 1275 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 DCUN1D1Q96GG9 259 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 VPS35Q96QK1 796 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 RAB17Q9H0T7 212 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 OR2AG1Q9H205 316 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 TCEAL2Q9H3H9 227 aaPredicted RBP19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 UGT1A7Q9HAW7 530 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 UGT1A10Q9HAW8 530 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 UGT1A8Q9HAW9 530 aa19■□□□□ 0.63
HLA-DRB1-201ENST00000360004 SYBUQ9NX95 663 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms