RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 LRRC8EQ6NSJ5 796 aa12.61□□□□□ -0.39
GGPS1-202ENST00000358966 MAVSQ7Z434 540 aa12.61□□□□□ -0.39
GGPS1-202ENST00000358966 TTC8Q8TAM2 541 aa12.61□□□□□ -0.39
GGPS1-202ENST00000358966 IGFLR1Q9H665 355 aa12.61□□□□□ -0.39
GGPS1-202ENST00000358966 GPAMQ9HCL2 828 aa12.61□□□□□ -0.39
GGPS1-202ENST00000358966 ZDHHC4Q9NPG8 344 aa12.61□□□□□ -0.39
GGPS1-202ENST00000358966 CATSPERZQ9NTU4 200 aa12.61□□□□□ -0.39
GGPS1-202ENST00000358966 MAFFQ9ULX9 164 aa12.61□□□□□ -0.39
GGPS1-202ENST00000358966 MRPS23Q9Y3D9 190 aaKnown RBP12.61□□□□□ -0.39
GGPS1-202ENST00000358966 PAPSS2O95340 614 aaPredicted RBP12.6□□□□□ -0.39
GGPS1-202ENST00000358966 SRCP12931 536 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 PMLP29590 882 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 TIAL1Q01085 375 aaKnown RBP eCLIP12.6□□□□□ -0.39
GGPS1-202ENST00000358966 PRSS36Q5K4E3 855 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 ATG16L1Q676U5 607 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 Q6ZVU0 165 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 TSPAN33Q86UF1 283 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 ZNF781Q8N8C0 355 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 FIBINQ8TAL6 211 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 GRIN3AQ8TCU5 1115 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 VOPP1Q96AW1 172 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 ASIC4Q96FT7 647 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 NSMCE4AQ9NXX6 385 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 HAO1Q9UJM8 370 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 COL6A3P12111 3177 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 CARNS1A5YM72 827 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 IQCF5A8MTL0 148 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 KLF11O14901 512 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 FMO4P31512 558 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 MC4RP32245 332 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 KCNC1P48547 511 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 EPHA5P54756 1037 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 NAGLUP54802 743 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 INO80DQ53TQ3 878 aaPredicted RBP12.6□□□□□ -0.39
GGPS1-202ENST00000358966 RETSATQ6NUM9 610 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 SFTPA1Q8IWL2 248 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 PEX5LQ8IYB4 626 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 CPXM2Q8N436 756 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 TMCO5AQ8N6Q1 288 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 FAM13CQ8NE31 585 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 SCG3Q8WXD2 468 aaKnown RBP12.6□□□□□ -0.39
GGPS1-202ENST00000358966 MYO19Q96H55 970 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 CENPKQ9BS16 269 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 GATA5Q9BWX5 397 aaPredicted RBP12.6□□□□□ -0.39
GGPS1-202ENST00000358966 PBX4Q9BYU1 374 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 NMUR2Q9GZQ4 415 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 IGSF5Q9NSI5 407 aa12.6□□□□□ -0.39
GGPS1-202ENST00000358966 KIAA1522Q9P206 1035 aaPredicted RBP12.6□□□□□ -0.39
GGPS1-202ENST00000358966 OTOL1A6NHN0 477 aaPredicted RBP12.59□□□□□ -0.39
GGPS1-202ENST00000358966 C5orf67F2Z3F1 127 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 BIRC5O15392 142 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 ENTPD5O75356 428 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 CYBBP04839 570 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 ARSAP15289 507 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 TSPAN8P19075 237 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 VHLP40337 213 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 ACVR1Q04771 509 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 CAMK2BQ13554 666 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 ZNF77Q15935 545 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 FAM151BQ6UXP7 276 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 RFLNAQ6ZTI6 216 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 C12orf40Q86WS4 652 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 CRLF3Q8IUI8 442 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 WDR75Q8IWA0 830 aaKnown RBP12.59□□□□□ -0.39
GGPS1-202ENST00000358966 TXNDC5Q8NBS9 432 aaKnown RBP12.59□□□□□ -0.39
GGPS1-202ENST00000358966 CHST14Q8NCH0 376 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 STYXQ8WUJ0 223 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 SMG7Q92540 1137 aaKnown RBP12.59□□□□□ -0.39
GGPS1-202ENST00000358966 C7orf26Q96N11 449 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 SLC30A3Q99726 388 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 VWA7Q9Y334 891 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 PIKFYVEQ9Y2I7 2098 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 TMEM233B4DJY2 109 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 DLX3O60479 287 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 CLDN7O95471 211 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 SERPINE1P05121 402 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 LYNP07948 512 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 PEX6Q13608 980 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 GEN1Q17RS7 908 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 INSCQ1MX18 579 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.59□□□□□ -0.39
GGPS1-202ENST00000358966 ZRANB3Q5FWF4 1079 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 CCNYL1Q8N7R7 359 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 CALML6Q8TD86 181 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 PIH1D2Q8WWB5 315 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 SREK1Q8WXA9 508 aaKnown RBP12.59□□□□□ -0.39
GGPS1-202ENST00000358966 IRF7Q92985 503 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 NMD3Q96D46 503 aaKnown RBP12.59□□□□□ -0.39
GGPS1-202ENST00000358966 PHF21BQ96EK2 531 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 LMLNQ96KR4 655 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 ADGRE3Q9BY15 652 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 ZDHHC6Q9H6R6 413 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 ALG9Q9H6U8 611 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 SPHK2Q9NRA0 654 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 THAP1Q9NVV9 213 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 NLE1Q9NVX2 485 aaPredicted RBP12.59□□□□□ -0.39
GGPS1-202ENST00000358966 STK39Q9UEW8 545 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 ZFP69BQ9UJL9 534 aa12.59□□□□□ -0.39
GGPS1-202ENST00000358966 C1orf232A0A0U1RR37 186 aa12.58□□□□□ -0.4
GGPS1-202ENST00000358966 C2orf81A6NN90 581 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms