RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 WDR93Q6P2C0 686 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 PTCHD4Q6ZW05 846 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 SYDE1Q6ZW31 735 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-203ENST00000357654 LAS2Q8IYD9 372 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 SMARCD2Q92925 531 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 CAPNS2Q96L46 248 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 PRMT6Q96LA8 375 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-203ENST00000357654 DGAT2Q96PD7 388 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 PAPOLGQ9BWT3 736 aaKnown RBP5.78□□□□□ -1.48
BRCA1-203ENST00000357654 CHIAQ9BZP6 476 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.78□□□□□ -1.484e-6■■■■■ 27.4
BRCA1-203ENST00000357654 NCANO14594 1321 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 A0A0G2JN53 185 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 PVALEFA0A1B0GWK0 134 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 PGRMC2O15173 223 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 INPPL1O15357 1258 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 EDN3P14138 238 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 MUTP22033 750 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 IL12AP29459 219 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 OR3A3P47888 321 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 OR3A2P47893 321 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 NRG1Q02297 640 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-203ENST00000357654 ARFRP1Q13795 201 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 IL18Q14116 193 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 MED22Q15528 200 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 KCTD21Q4G0X4 260 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 CDONQ4KMG0 1287 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 TMC3Q7Z5M5 1100 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.78□□□□□ -1.48
BRCA1-203ENST00000357654 ZNF567Q8N184 647 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 PRR18Q8N4B5 295 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 HJURPQ8NCD3 748 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-203ENST00000357654 OR52K2Q8NGK3 314 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 TBC1D15Q8TC07 691 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 DNAJA4Q8WW22 397 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-203ENST00000357654 STARD8Q92502 1023 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 FAM84BQ96KN1 310 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-203ENST00000357654 ZNF607Q96SK3 696 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 NUP153P49790 1475 aaKnown RBP5.78□□□□□ -1.48
BRCA1-203ENST00000357654 MAGEA13PA6NCF6 341 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 LACTBL1A8MY62 500 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 KCNK1O00180 336 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 TNFRSF10BO14763 440 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 SLC16A3O15427 465 aaKnown RBP5.78□□□□□ -1.48
BRCA1-203ENST00000357654 PHGDHO43175 533 aaKnown RBP5.78□□□□□ -1.48
BRCA1-203ENST00000357654 B3GALT2O43825 422 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 PEX11AO75192 247 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 UGT2B4P06133 528 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 ETS1P14921 441 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 AFF1P51825 1210 aaKnown RBP5.78□□□□□ -1.48
BRCA1-203ENST00000357654 ANTXR2P58335 489 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 SLC26A5P58743 744 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 SLC34A1Q06495 639 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 SPIRE1Q08AE8 756 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 ZNF543Q08ER8 600 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 STEAP3Q658P3 488 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 KDELC1Q6UW63 502 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 ZNF572Q7Z3I7 529 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-203ENST00000357654 DEFB106AQ8N104 65 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 ZNF557Q8N988 423 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-203ENST00000357654 KLHL6Q8WZ60 621 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 FUBP3Q96I24 572 aaKnown RBP eCLIP5.78□□□□□ -1.48
BRCA1-203ENST00000357654 ZNF350Q9GZX5 532 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 COMMD4Q9H0A8 199 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 GANQ9H2C0 597 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 FBRSL1Q9HCM7 1045 aaKnown RBP5.78□□□□□ -1.48
BRCA1-203ENST00000357654 ABCB8Q9NUT2 735 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 MTRRQ9UBK8 725 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 ZNF639Q9UID6 485 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 ZNF180Q9UJW8 692 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 PCDHB2Q9Y5E7 798 aa5.78□□□□□ -1.48
BRCA1-203ENST00000357654 PIK3C2GO75747 1445 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 USP6P35125 1406 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 SAP18O00422 153 aaKnown RBP5.77□□□□□ -1.49
BRCA1-203ENST00000357654 SMIM10L2AP0DMW4 78 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 SMIM10L2BP0DMW5 78 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 ATF4P18848 351 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-203ENST00000357654 GRK6P43250 576 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 HCAR3P49019 387 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 ARPC4P59998 168 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 RPL6Q02878 288 aaKnown RBP5.77□□□□□ -1.49
BRCA1-203ENST00000357654 IL18R1Q13478 541 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 FAM187BQ17R55 369 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 EMBQ6PCB8 327 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 LINGO4Q6UY18 593 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 GSTCDQ8NEC7 633 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 COPS5Q92905 334 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 LRRC58Q96CX6 371 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 ZDHHC15Q96MV8 337 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 P2RX7Q99572 595 aaKnown RBP5.77□□□□□ -1.49
BRCA1-203ENST00000357654 PHB2Q99623 299 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 C17orf62Q9BQA9 187 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 C1orf50Q9BV19 199 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 ULBP1Q9BZM6 244 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 C11orf49Q9H6J7 331 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 ABCC13Q9NSE7 274 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 ZNF224Q9NZL3 707 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 GNG13Q9P2W3 67 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 TBC1D30Q9Y2I9 924 aa5.77□□□□□ -1.49
BRCA1-203ENST00000357654 NPIPA5E9PKD4 350 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms