RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 FADS3Q9Y5Q0 445 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 G3V2T6 193 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 DUSP11O75319 330 aaKnown RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 SLC25A14O95258 325 aaPredicted RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 ENO2P09104 434 aaPredicted RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 ELFN1P0C7U0 828 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 UROSP10746 265 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 IL12AP29459 219 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 BRCC3P46736 316 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 POLR2JP52435 117 aaKnown RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 RAB25P57735 213 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 MBTD1Q05BQ5 628 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 TAF10Q12962 218 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 KLHL35Q6PF15 583 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 CXXC5Q7LFL8 322 aaKnown RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 PEG10Q86TG7 708 aaKnown RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 C17orf64Q86WR6 236 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 HEATR4Q86WZ0 1026 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 UNC5BQ8IZJ1 945 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 SNX27Q96L92 541 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 AIF1LQ9BQI0 150 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 TIMMDC1Q9NPL8 285 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 STON1Q9Y6Q2 735 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 A0A1B0GVM2 712 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 ATP6AP2A0A1C7CYW4 349 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 TCAF2A6NFQ2 919 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 HAT1O14929 419 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 ERN1O75460 977 aaKnown RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 ATP6AP2O75787 350 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 PRPS2P11908 318 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 UNGP13051 313 aaPredicted RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 PRG2P13727 222 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 MPSTP25325 297 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 IL10RBQ08334 325 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 MTAPQ13126 283 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 ZIK1Q3SY52 487 aaPredicted RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 DSELQ8IZU8 1212 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 SMYD1Q8NB12 490 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 GLB1L3Q8NCI6 653 aaPredicted RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 PNPT1Q8TCS8 783 aaKnown RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 NTAN1Q96AB6 310 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 B3GNT5Q9BYG0 378 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 KLHL31Q9H511 634 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 MIOSQ9NXC5 875 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 NDOR1Q9UHB4 597 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 AJAP1Q9UKB5 411 aaPredicted RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 C5P01031 1676 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 A0A1W2PQH9 124 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 A8MX80 341 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 AREL1O15033 823 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 NDUFB5O43674 189 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 OR10H3O60404 316 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 PGM3O95394 542 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 TACR2P21452 398 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 PRKAG1P54619 331 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 CDH13P55290 713 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 SPIBQ01892 262 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 KIAA0930Q6ICG6 404 aaPredicted RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 AMIGO2Q86SJ2 522 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 RTL3Q8N8U3 475 aaKnown RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 HM13Q8TCT9 377 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 RASSF5Q8WWW0 418 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 POLR3HQ9Y535 204 aaPredicted RBP11.7□□□□□ -0.54
COL9A1-202ENST00000357250 ZNF780BQ9Y6R6 833 aa11.7□□□□□ -0.54
COL9A1-202ENST00000357250 VIRMAQ69YN4 1812 aaKnown RBP11.69□□□□□ -0.54
COL9A1-202ENST00000357250 CACNB4O00305 520 aaPredicted RBP11.69□□□□□ -0.54
COL9A1-202ENST00000357250 ATG13O75143 517 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 ESR1P03372 595 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 ZBTB48P10074 688 aaPredicted RBP11.69□□□□□ -0.54
COL9A1-202ENST00000357250 MYL9P24844 172 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 CDH5P33151 784 aaPredicted RBP11.69□□□□□ -0.54
COL9A1-202ENST00000357250 GPAT3Q53EU6 434 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 RBM44Q6ZP01 1051 aaKnown RBP11.69□□□□□ -0.54
COL9A1-202ENST00000357250 OR4K2Q8NGD2 314 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 FUBP3Q96I24 572 aaKnown RBP eCLIP11.69□□□□□ -0.54
COL9A1-202ENST00000357250 FZD8Q9H461 694 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 INTS7Q9NVH2 962 aaKnown RBP11.69□□□□□ -0.54
COL9A1-202ENST00000357250 ADGRE2Q9UHX3 823 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 ASF1AQ9Y294 204 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 GRIN2DO15399 1336 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 H0YC42 278 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 IFNGP01579 166 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 CCNYL3P0C7X3 344 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 PRKAR2AP13861 404 aaKnown RBP11.69□□□□□ -0.54
COL9A1-202ENST00000357250 OR1D2P34982 312 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 SEMA5AQ13591 1074 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 SLC5A9Q2M3M2 681 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 FNBP1LQ5T0N5 605 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 TSTD2Q5T7W7 516 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 DENND5AQ6IQ26 1287 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 ZBTB2Q8N680 514 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 PPP1R14AQ96A00 147 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 MCRS1Q96EZ8 462 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 LMAN2LQ9H0V9 348 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 CAB39LQ9H9S4 337 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 MRPL39Q9NYK5 338 aaKnown RBP11.69□□□□□ -0.54
COL9A1-202ENST00000357250 CLIC5Q9NZA1 410 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 PTGFRNQ9P2B2 879 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 DNAJB4Q9UDY4 337 aa11.69□□□□□ -0.54
COL9A1-202ENST00000357250 PRDM4Q9UKN5 801 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms