RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 C12orf4Q9NQ89 552 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 TMEM9Q9P0T7 183 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 RBPJLQ9UBG7 517 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 NCF1BA6NI72 391 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 NCF1CA8MVU1 366 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 ADM5C9JUS6 153 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 LTA4HP09960 611 aaKnown RBP8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 ALDOCP09972 364 aaKnown RBP8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 PCNAP12004 261 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 NCF1P14598 390 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 BDNFP23560 247 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 EEF1DP29692 281 aaKnown RBP8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 BMPR1AP36894 532 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 KCNC1P48547 511 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 APLP1P51693 650 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 CTAG1AP78358 180 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 GALNT2Q10471 571 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 TUBA3CQ13748 450 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 RAB39AQ14964 217 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 PFKFB4Q16877 469 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 SV2CQ496J9 727 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 RABL3Q5HYI8 236 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 PAQR9Q6ZVX9 377 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 KCTD8Q6ZWB6 473 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 RALGPS2Q86X27 583 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 EPHX4Q8IUS5 362 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 CMTR2Q8IYT2 770 aaKnown RBP8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 BPIFB6Q8NFQ5 453 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 HDAC10Q969S8 669 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 EMID1Q96A84 441 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 PABPC5Q96DU9 382 aaKnown RBP8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 ZNF419Q96HQ0 510 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 DHRS9Q9BPW9 319 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 NPLQ9BXD5 320 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 B3GNT4Q9C0J1 378 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 ING2Q9H160 280 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 TRIT1Q9H3H1 467 aaKnown RBP8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 HMG20AQ9NP66 347 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 NDFIP2Q9NV92 336 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 TMEM30AQ9NV96 361 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 ARMC1Q9NVT9 282 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 MPP6Q9NZW5 540 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 WARS2Q9UGM6 360 aaKnown RBP8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 NDUFAF1Q9Y375 327 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 SIP14410 1827 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 PIRO00625 290 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 ASNA1O43681 348 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 SCO2O43819 266 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 IDH3BO43837 385 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 JRKO75564 520 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 KCNH1O95259 989 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 GFAPP14136 432 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 HGFP14210 728 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 SERPINB1P30740 379 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 FOXA1P55317 472 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 TPD52P55327 224 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 DAOAP59103 153 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 PPP2R2BQ00005 443 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 ECT2LQ008S8 904 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 GRB7Q14451 532 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 KIAA0319Q5VV43 1072 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 UBE2UQ5VVX9 321 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 TUBA3EQ6PEY2 450 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 TFAP2DQ7Z6R9 452 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 FUNDC1Q8IVP5 155 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 PDPRQ8NCN5 879 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 TOR1AIP2Q8NFQ8 470 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 DNAJB3Q8WWF6 145 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 PCED1BQ96HM7 432 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 NSUN5Q96P11 429 aaKnown RBP8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 VAT1Q99536 393 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 IRF2BPLQ9H1B7 796 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 MEAF6Q9HAF1 191 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 IGSF5Q9NSI5 407 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 TMEM181Q9P2C4 612 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 TSR3Q9UJK0 312 aaKnown RBP8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 TCAF1Q9Y4C2 921 aa8.21□□□□□ -1.1
CDC42SE1-201ENST00000357235 ZNF638Q14966 1978 aaKnown RBP8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 BRCA2P51587 3418 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 A0A087X1B8 175 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 PIP5K1BO14986 540 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 ANXA9O76027 345 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 SNAP29O95721 258 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 SLC25A27O95847 323 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 CAPNS1P04632 268 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 PIRTP0C851 137 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 IDUAP35475 653 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 SCNN1AP37088 669 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 ARCN1P48444 511 aaKnown RBP8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 COPZ1P61923 177 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 POU4F1Q01851 419 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 TRAP1Q12931 704 aaKnown RBP8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 NFYCQ13952 458 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 MAPRE1Q15691 268 aaKnown RBP8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 ZBTB6Q15916 424 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 INAVAQ3KP66 663 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 TECRLQ5HYJ1 363 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 MARCH8Q5T0T0 291 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 DSG4Q86SJ6 1040 aa8.2□□□□□ -1.1
CDC42SE1-201ENST00000357235 DHRSXQ8N5I4 330 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms