RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 MFSD11O43934 449 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 CTPS1P17812 591 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 ATN1P54259 1190 aaPredicted RBP14.79□□□□□ -0.04
CHD4-201ENST00000357008 UBE2R2Q712K3 238 aaPredicted RBP14.79□□□□□ -0.04
CHD4-201ENST00000357008 BANPQ8N9N5 519 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 KLHL23Q8NBE8 558 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 KLHL5Q96PQ7 755 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 EBF3Q9H4W6 596 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 GIN1Q9NXP7 522 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 GRHL1Q9NZI5 618 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 PCDHGC3Q9UN70 934 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 POMPQ9Y244 141 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 PCDHGA4Q9Y5G9 962 aa14.79□□□□□ -0.04
CHD4-201ENST00000357008 GCATO75600 419 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 SCELO95171 688 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 IFNGP01579 166 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 C4BPAP04003 597 aaKnown RBP14.78□□□□□ -0.04
CHD4-201ENST00000357008 HDCP19113 662 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 ACAP2Q15057 778 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 DRICH1Q6PGQ1 229 aaPredicted RBP14.78□□□□□ -0.04
CHD4-201ENST00000357008 FAM151BQ6UXP7 276 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 TMPRSS11AQ6ZMR5 421 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 MON1AQ86VX9 555 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.78□□□□□ -0.042e-13■■■■□ 22.5
CHD4-201ENST00000357008 LMAN2LQ9H0V9 348 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 UGT1A5P35504 534 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 HNF4AP41235 474 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 RAB15P59190 212 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 IL18Q14116 193 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 GRIK5Q16478 980 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 UBR7Q8N806 425 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 B3GNT5Q9BYG0 378 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 GBA3Q9H227 469 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 IKZF4Q9H2S9 585 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 AGO3Q9H9G7 860 aaKnown RBP14.78□□□□□ -0.04
CHD4-201ENST00000357008 PEX16Q9Y5Y5 336 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 MDM4O15151 490 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 CILPO75339 1184 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 SMIM10L2AP0DMW4 78 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 SMIM10L2BP0DMW5 78 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 MANFP55145 182 aaKnown RBP14.78□□□□□ -0.04
CHD4-201ENST00000357008 SCN1BQ07699 218 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 ADGRE1Q14246 886 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 INTS6LQ5JSJ4 861 aaKnown RBP14.78□□□□□ -0.04
CHD4-201ENST00000357008 ZZZ3Q8IYH5 903 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 SVOPLQ8N434 492 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 CLHC1Q8NHS4 586 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 DIRAS2Q96HU8 199 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 KCTD15Q96SI1 283 aaPredicted RBP14.78□□□□□ -0.04
CHD4-201ENST00000357008 SP140LQ9H930 580 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 TAS2R1Q9NYW7 299 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 WASF2Q9Y6W5 498 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 E7ENX8 843 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 PGK1P00558 417 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 C9P02748 559 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 CXCR3P49682 368 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 APOLD1Q96LR9 279 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 GPN1Q9HCN4 374 aaPredicted RBP14.78□□□□□ -0.04
CHD4-201ENST00000357008 CIDEBQ9UHD4 219 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 OR10H1Q9Y4A9 318 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 TRAV19A0A0A6YYK7 116 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 MRPS6P82932 125 aaKnown RBP14.78□□□□□ -0.04
CHD4-201ENST00000357008 GPR158Q5T848 1215 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 GALNT15Q8N3T1 639 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 ZNF781Q8N8C0 355 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 GATA5Q9BWX5 397 aaPredicted RBP14.78□□□□□ -0.04
CHD4-201ENST00000357008 INTS7Q9NVH2 962 aaKnown RBP14.78□□□□□ -0.04
CHD4-201ENST00000357008 PDE10AQ9Y233 779 aa14.78□□□□□ -0.04
CHD4-201ENST00000357008 CARNS1A5YM72 827 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 STX16-NPEPL1H3BU86 382 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 STX16O14662 325 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 FGBP02675 491 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 ASMTP46597 345 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 AKR1D1P51857 326 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 LCP2Q13094 533 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 RALGPS1Q5JS13 557 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 DNAJB4Q9UDY4 337 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 SLC22A2O15244 555 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 TEX28O15482 410 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 CDH5P33151 784 aaPredicted RBP14.77□□□□□ -0.04
CHD4-201ENST00000357008 CBX3Q13185 183 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 COL9A3Q14050 684 aaPredicted RBP14.77□□□□□ -0.04
CHD4-201ENST00000357008 ZNF572Q7Z3I7 529 aaPredicted RBP14.77□□□□□ -0.04
CHD4-201ENST00000357008 FAM84AQ96KN4 292 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 PHF12Q96QT6 1004 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 CITED4Q96RK1 184 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 AARSD1Q9BTE6 412 aaKnown RBP14.77□□□□□ -0.04
CHD4-201ENST00000357008 RSPH9Q9H1X1 276 aaPredicted RBP14.77□□□□□ -0.04
CHD4-201ENST00000357008 ARHGAP23Q9P227 1491 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 OR10H2O60403 315 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 AP2A2O94973 939 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 FESP07332 822 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 ECT2LQ008S8 904 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 BEX3Q00994 111 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 IL23RQ5VWK5 629 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 OTOP3Q7RTS5 596 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 HEXDCQ8WVB3 486 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 BCL2L14Q9BZR8 327 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 TIMM22Q9Y584 194 aa14.77□□□□□ -0.04
CHD4-201ENST00000357008 FAM86C2PA6NEL3 165 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms