RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 LXNQ9BS40 222 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 ZC4H2Q9NQZ6 224 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 ACSS2Q9NR19 701 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 INTS6Q9UL03 887 aaKnown RBP15.67■□□□□ 0.1
RTN3-205ENST00000356000 PNMA8BQ9ULN7 279 aaPredicted RBP15.67■□□□□ 0.1
RTN3-205ENST00000356000 ZNF541Q9H0D2 1346 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 A8MUA0 341 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 ZNF487B1APH4 448 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 USP17L10C9JJH3 530 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 PTGES3LE9PB15 166 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 LRCH4O75427 683 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 NTSR2O95665 410 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 RPS5P46782 204 aaKnown RBP15.67■□□□□ 0.1
RTN3-205ENST00000356000 GNPDA1P46926 289 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 ATP5OP48047 213 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 CD47Q08722 323 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 SEMA3BQ13214 749 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 SLAMF1Q13291 335 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 HADHQ16836 314 aaKnown RBP15.67■□□□□ 0.1
RTN3-205ENST00000356000 OTUD3Q5T2D3 398 aaPredicted RBP15.67■□□□□ 0.1
RTN3-205ENST00000356000 GARNL3Q5VVW2 1013 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 NRARPQ7Z6K4 114 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 CLEC14AQ86T13 490 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 NXF2Q9GZY0 626 aaKnown RBP15.67■□□□□ 0.1
RTN3-205ENST00000356000 DCSTAMPQ9H295 470 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 NMRAL1Q9HBL8 299 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 WBP1LQ9NX94 342 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 MKLN1Q9UL63 735 aa15.67■□□□□ 0.1
RTN3-205ENST00000356000 MTF2Q9Y483 593 aaPredicted RBP15.67■□□□□ 0.1
RTN3-205ENST00000356000 SPDYE2BA6NHP3 402 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 ARPC2O15144 300 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 KCNN4O15554 427 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 MAP3K6O95382 1288 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 MED26O95402 600 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 ALPLP05186 524 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 CYP3A4P08684 503 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 SPDYE6P0CI01 402 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 CSTF2P33240 577 aaKnown RBP eCLIP15.66■□□□□ 0.1
RTN3-205ENST00000356000 TGFBR1P36897 503 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 RAP1GAPP47736 663 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 FADDQ13158 208 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 DEFB115Q30KQ5 88 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 PLEKHG6Q3KR16 790 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 SPDYE2Q495Y8 402 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 BRDTQ58F21 947 aaPredicted RBP15.66■□□□□ 0.1
RTN3-205ENST00000356000 VARS2Q5ST30 1063 aaKnown RBP15.66■□□□□ 0.1
RTN3-205ENST00000356000 SP8Q8IXZ3 490 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 TMEM199Q8N511 208 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 C2orf69Q8N8R5 385 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 KDM1BQ8NB78 822 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 OPALINQ96PE5 141 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 C6orf62Q9GZU0 229 aaPredicted RBP15.66■□□□□ 0.1
RTN3-205ENST00000356000 NGRNQ9NPE2 291 aaKnown RBP15.66■□□□□ 0.1
RTN3-205ENST00000356000 MRPL39Q9NYK5 338 aaKnown RBP15.66■□□□□ 0.1
RTN3-205ENST00000356000 PCDH10Q9P2E7 1040 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 SEPT9Q9UHD8 586 aaPredicted RBP15.66■□□□□ 0.1
RTN3-205ENST00000356000 MID2Q9UJV3 735 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 USP22Q9UPT9 525 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 TCRBV5S2A0A599 114 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 H3BQ06 376 aaPredicted RBP15.66■□□□□ 0.1
RTN3-205ENST00000356000 POU3F3P20264 500 aaPredicted RBP15.66■□□□□ 0.1
RTN3-205ENST00000356000 HAAOP46952 286 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 DBPQ10586 325 aaPredicted RBP15.66■□□□□ 0.1
RTN3-205ENST00000356000 KCTD6Q8NC69 237 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 TESCQ96BS2 214 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 NEDD4LQ96PU5 975 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 KAT8Q9H7Z6 458 aaKnown RBP15.66■□□□□ 0.1
RTN3-205ENST00000356000 ADARB2Q9NS39 739 aaKnown RBP15.66■□□□□ 0.1
RTN3-205ENST00000356000 ASNSD1Q9NWL6 643 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 PGAP2Q9UHJ9 254 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 TBC1D24Q9ULP9 559 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 MAN2B2Q9Y2E5 1009 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 ZNF175Q9Y473 711 aa15.66■□□□□ 0.1
RTN3-205ENST00000356000 CNTN5O94779 1100 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 PRKCBP05771 671 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 ZNF250P15622 560 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 RIN1Q13671 783 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 SUSD4Q5VX71 490 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 ZYG11AQ6WRX3 759 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 OTOP1Q7RTM1 612 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 PRSS42Q7Z5A4 293 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 SAMD14Q8IZD0 417 aaPredicted RBP15.65■□□□□ 0.1
RTN3-205ENST00000356000 CPA6Q8N4T0 437 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 KCTD4Q8WVF5 259 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 RPL3LQ92901 407 aaKnown RBP15.65■□□□□ 0.1
RTN3-205ENST00000356000 NCLNQ969V3 563 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 MFSD14AQ96MC6 490 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 SLC30A3Q99726 388 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.65■□□□□ 0.1
RTN3-205ENST00000356000 TOR3AQ9H497 397 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 FAM118AQ9NWS6 357 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 MTMR4Q9NYA4 1195 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 TAS2R7Q9NYW3 318 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 STOML2Q9UJZ1 356 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 EFCAB9A8MZ26 197 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 UMPSP11172 480 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 TPSB2P20231 275 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 PSMA2P25787 234 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 SREBF1P36956 1147 aa15.65■□□□□ 0.1
RTN3-205ENST00000356000 TPD52P55327 224 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms