RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 DLG1Q12959 904 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 CPSF6Q16630 551 aaKnown RBP eCLIP12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 ATP13A5Q4VNC0 1218 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 XKR6Q5GH73 641 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 HECTD2Q5U5R9 776 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 SYCE2Q6PIF2 218 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 MYOZ2Q9NPC6 264 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 UPB1Q9UBR1 384 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 ABT1Q9ULW3 272 aaKnown RBP12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 TARBP1Q13395 1621 aaKnown RBP12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 ISPDA4D126 451 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 CASTOR2A6NHX0 329 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 INSRRP14616 1297 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 CD36P16671 472 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 RPL4P36578 427 aaKnown RBP12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 MATKP42679 507 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 KIR3DL1P43629 444 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 PITPNAQ00169 270 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 HSPA14Q0VDF9 509 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 PAN2Q504Q3 1202 aaKnown RBP12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 PLEKHG4Q58EX7 1191 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 COLEC12Q5KU26 742 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZDHHC24Q6UX98 284 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 CENPSQ8N2Z9 138 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 REPS2Q8NFH8 660 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZNF420Q8TAQ5 688 aaPredicted RBP12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 GATA5Q9BWX5 397 aaPredicted RBP12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 BCL2L14Q9BZR8 327 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 TOR3AQ9H497 397 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 LRTM1Q9HBL6 345 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 CLPXO76031 633 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 PTPN1P18031 435 aaKnown RBP12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 MAPK8P45983 427 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 TAS2R41P59536 307 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 ACAP2Q15057 778 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 CPTPQ5TA50 214 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 TAPT1Q6NXT6 567 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 AGBL3Q8NEM8 1001 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 C9orf43Q8TAL5 461 aaPredicted RBP12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 TRNT1Q96Q11 434 aaKnown RBP12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 MROH8Q9H579 483 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 EMC3Q9P0I2 261 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 TIMM13Q9Y5L4 95 aaPredicted RBP12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 SNX4O95219 450 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 LRATO95237 230 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 PSKH1P11801 424 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 DAG1Q14118 895 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 SNAPC1Q16533 368 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 GNASQ5JWF2 1037 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 TMEM214Q6NUQ4 689 aaKnown RBP12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 DSG4Q86SJ6 1040 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 TMEM126BQ8IUX1 230 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 PPCDCQ96CD2 204 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 KREMEN1Q96MU8 473 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 AGAP2Q99490 1192 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 OSMRQ99650 979 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 ACAT2Q9BWD1 397 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 EI24O14681 340 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 MID1O15344 667 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 CEP152O94986 1710 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 IFI30P13284 250 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 LPOP22079 712 aaPredicted RBP12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 THPOP40225 353 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 SKP1P63208 163 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 KCTD19Q17RG1 926 aaPredicted RBP12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 PPM1JQ5JR12 505 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 UBE2Q1Q7Z7E8 422 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 SLC22A16Q86VW1 577 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 CCDC28AQ8IWP9 274 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 CNTNAP4Q9C0A0 1308 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 ILVBLA1L0T0 632 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 MT-ND1P03886 318 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 CDK18Q07002 472 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 CERCAMQ5T4B2 595 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZNF517Q6ZMY9 492 aaPredicted RBP12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 MON1BQ7L1V2 547 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 C4orf32Q8N8J7 132 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 I3L521 148 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 GABBR2O75899 941 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 PRAMEF1O95521 474 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 IFNA6P05013 189 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 PEPDP12955 493 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 TLX1P31314 330 aaPredicted RBP12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 DCDC1P59894 354 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 RNASE12Q5GAN4 147 aaKnown RBP12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 SH3D19Q5HYK7 790 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 GALNT12Q8IXK2 581 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 PGBD3Q8N328 593 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 TMIEQ8NEW7 156 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 ERLEC1Q96DZ1 483 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZYG11BQ9C0D3 744 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 SDCBP2Q9H190 292 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 DEFB129Q9H1M3 183 aa12.65□□□□□ -0.38
SYNCRIP-201ENST00000355238 NFASCO94856 1347 aa12.65□□□□□ -0.39
SYNCRIP-201ENST00000355238 PLOD2O00469 737 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 SLC28A2O43868 658 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 APOL3O95236 402 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 MYCP01106 439 aaPredicted RBP12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 CSH1P0DML2 217 aa12.64□□□□□ -0.39
SYNCRIP-201ENST00000355238 CSH2P0DML3 217 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms