RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 PGGT1BP53609 377 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 PTSQ03393 145 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 PTPRRQ15256 657 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 C12orf40Q86WS4 652 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 RBFAQ8N0V3 343 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 CD200R1Q8TD46 325 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 PPM1EQ8WY54 764 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 CCDC106Q9BWC9 280 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 HPS4Q9NQG7 708 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 SLC8A2Q9UPR5 921 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 GOLGA8CPA6NN73 597 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 HEPACAM2A8MVW5 462 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 RHOBTB1O94844 696 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 CYP2A6P11509 494 aaPredicted RBP17.1■□□□□ 0.33
VPS13B-201ENST00000355155 TFEBP19484 476 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 SERPINB3P29508 390 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 IDH3AP50213 366 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 PDAP1Q13442 181 aaKnown RBP17.1■□□□□ 0.33
VPS13B-201ENST00000355155 COL19A1Q14993 1142 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 ZRANB3Q5FWF4 1079 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 SH2D4BQ5SQS7 431 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 CHST14Q8NCH0 376 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 OR6K2Q8NGY2 324 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 S1PR5Q9H228 398 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 PNPOQ9NVS9 261 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 THG1LQ9NWX6 298 aaKnown RBP17.1■□□□□ 0.33
VPS13B-201ENST00000355155 COL4A2P08572 1712 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 GLYATL1P3A0A0U1RQE8 302 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 EIF3FO00303 357 aaPredicted RBP17.1■□□□□ 0.33
VPS13B-201ENST00000355155 TULP3O75386 442 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 CSPG5O95196 566 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 HSPA4LO95757 839 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 C1SP09871 688 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 MTHFD2P13995 350 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 ZNF7P17097 686 aaPredicted RBP17.1■□□□□ 0.33
VPS13B-201ENST00000355155 FMO4P31512 558 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 VIPR1P32241 457 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 NNMTP40261 264 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 GLRBP48167 497 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 RPL14P50914 215 aaKnown RBP17.1■□□□□ 0.33
VPS13B-201ENST00000355155 FRMD7Q6ZUT3 714 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 Q6ZVU0 165 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 DPPA4Q7L190 304 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 ZNF781Q8N8C0 355 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 THOC1Q96FV9 657 aaKnown RBP17.1■□□□□ 0.33
VPS13B-201ENST00000355155 MAELQ96JY0 434 aaKnown RBP17.1■□□□□ 0.33
VPS13B-201ENST00000355155 FAR2Q96K12 515 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 CCDC28BQ9BUN5 200 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 CCDC68Q9H2F9 335 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 BRD9Q9H8M2 597 aa17.1■□□□□ 0.33
VPS13B-201ENST00000355155 STX16-NPEPL1H3BU86 382 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 STX16O14662 325 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 SLC22A2O15244 555 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 RASSF9O75901 435 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 LHCGRP22888 699 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 SATB1Q01826 763 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 ADAM15Q13444 863 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 RARS2Q5T160 578 aaKnown RBP17.09■□□□□ 0.33
VPS13B-201ENST00000355155 TRIM67Q6ZTA4 783 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 TMIEQ8NEW7 156 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 SLC7A6OSQ96CW6 309 aaPredicted RBP17.09■□□□□ 0.33
VPS13B-201ENST00000355155 BPIFA1Q9NP55 256 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 ELOVL2Q9NXB9 296 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 IL36AQ9UHA7 158 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 PSMD11O00231 422 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 FCHO1O14526 889 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 PRAMEF1O95521 474 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 TPBGLP0DKB5 382 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 AOC1P19801 751 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 VIPR2P41587 438 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 ZNF805Q5CZA5 627 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 ARL13AQ5H913 290 aaPredicted RBP17.09■□□□□ 0.33
VPS13B-201ENST00000355155 TCEAL5Q5H9L2 206 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 ZNF678Q5SXM1 525 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 SERPINA9Q86WD7 417 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 ELSPBP1Q96BH3 223 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 GSTO2Q9H4Y5 243 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 POMKQ9H5K3 350 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 GNPTGQ9UJJ9 305 aa17.09■□□□□ 0.33
VPS13B-201ENST00000355155 GRID2O43424 1007 aa17.08■□□□□ 0.33
VPS13B-201ENST00000355155 ZBTB14O43829 449 aa17.08■□□□□ 0.33
VPS13B-201ENST00000355155 KCNC1P48547 511 aa17.08■□□□□ 0.33
VPS13B-201ENST00000355155 SPINT3P49223 89 aa17.08■□□□□ 0.33
VPS13B-201ENST00000355155 NAGLUP54802 743 aa17.08■□□□□ 0.33
VPS13B-201ENST00000355155 LRRC66Q68CR7 880 aa17.08■□□□□ 0.33
VPS13B-201ENST00000355155 PAQR3Q6TCH7 311 aa17.08■□□□□ 0.33
VPS13B-201ENST00000355155 NXPE1Q8N323 547 aa17.08■□□□□ 0.33
VPS13B-201ENST00000355155 PNPLA1Q8N8W4 532 aa17.08■□□□□ 0.33
VPS13B-201ENST00000355155 GIMAP7Q8NHV1 300 aa17.08■□□□□ 0.33
VPS13B-201ENST00000355155 STAG3L4Q8TBR4 150 aa17.08■□□□□ 0.33
VPS13B-201ENST00000355155 ZDHHC6Q9H6R6 413 aa17.08■□□□□ 0.33
VPS13B-201ENST00000355155 UPK3BL1B0FP48 263 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 UPK3BL2E5RIL1 263 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 HDAC3O15379 428 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 ARSAP15289 507 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 TIMP2P16035 220 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 KCNA5P22460 613 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 PRDX6P30041 224 aa17.08■□□□□ 0.32
VPS13B-201ENST00000355155 RECQLP46063 649 aaPredicted RBP17.08■□□□□ 0.32
VPS13B-201ENST00000355155 RASSF2P50749 326 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms