RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 LBHD1Q9BQE6 289 aaPredicted RBP20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 TMEM106CQ9BVX2 250 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 SLC46A2Q9BY10 475 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 ASAH2Q9NR71 780 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 ABCB8Q9NUT2 735 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 HCFC1R1Q9NWW0 138 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 GALPQ9UBC7 116 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 EVLQ9UI08 416 aaPredicted RBP20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 PRPF19Q9UMS4 504 aaKnown RBP20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 SYCE1LA8MT33 242 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 FKBP6O75344 327 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 SIX3O95343 332 aaPredicted RBP20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 GLUD1P00367 558 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 ESR1P03372 595 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 ALPIP09923 528 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 HSPA1AP0DMV8 641 aaKnown RBP20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 HSPA1BP0DMV9 641 aaKnown RBP20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 CDH13P55290 713 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 AP2B1P63010 937 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 SH3BP2P78314 561 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 BCL2L1Q07817 233 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 TAF11Q15544 211 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 PLEKHG6Q3KR16 790 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 UGT3A2Q3SY77 523 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 CLEC6AQ6EIG7 209 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 AAGABQ6PD74 315 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 TAS2R42Q7RTR8 314 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 DSELQ8IZU8 1212 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 SLC30A3Q99726 388 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 C19orf43Q9BQ61 176 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 EMILIN2Q9BXX0 1053 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 TRMT6Q9UJA5 497 aaKnown RBP20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 ANGPTL2Q9UKU9 493 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 SLC30A1Q9Y6M5 507 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 GBF1Q92538 1859 aa20.23■□□□□ 0.83
CHRNA3-202ENST00000348639 SUPT3HB4E1H0 165 aa20.23■□□□□ 0.83
CHRNA3-202ENST00000348639 NIPSNAP2O75323 286 aa20.23■□□□□ 0.83
CHRNA3-202ENST00000348639 SUPT3HO75486 399 aa20.23■□□□□ 0.83
CHRNA3-202ENST00000348639 CDK14O94921 469 aa20.23■□□□□ 0.83
CHRNA3-202ENST00000348639 LBX1P52954 281 aa20.23■□□□□ 0.83
CHRNA3-202ENST00000348639 TSNQ15631 228 aaKnown RBP20.23■□□□□ 0.83
CHRNA3-202ENST00000348639 LRRC74BQ6ZQY2 392 aa20.23■□□□□ 0.83
CHRNA3-202ENST00000348639 NRG4Q8WWG1 115 aa20.23■□□□□ 0.83
CHRNA3-202ENST00000348639 FUBP1Q96AE4 644 aaKnown RBP20.23■□□□□ 0.83
CHRNA3-202ENST00000348639 PRKAG2Q9UGJ0 569 aa20.23■□□□□ 0.83
CHRNA3-202ENST00000348639 IKZF3Q9UKT9 509 aa20.23■□□□□ 0.83
CHRNA3-202ENST00000348639 POMPQ9Y244 141 aa20.23■□□□□ 0.83
CHRNA3-202ENST00000348639 CXorf51AA0A1B0GTR3 108 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 UBDO15205 165 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 SOCS5O75159 536 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 TSPAN12O95859 305 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 CD70P32970 193 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 CERS6Q6ZMG9 384 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 CYHR1Q6ZMK1 362 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 HPS6Q86YV9 775 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 FBXO39Q8N4B4 442 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 SIDT2Q8NBJ9 832 aaKnown RBP20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 CD200R1Q8TD46 325 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 RCN3Q96D15 328 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 P2RY12Q9H244 342 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 EFCAB1Q9HAE3 211 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 NDE1Q9NXR1 346 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 WASF2Q9Y6W5 498 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 A0A0J9YYE9 177 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 LRRC14BA6NHZ5 514 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 CDC7O00311 574 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 CLASP2O75122 1294 aaKnown RBP20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 ECI2O75521 394 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 ZNF821O75541 412 aaPredicted RBP20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 SORBS2O94875 1100 aaKnown RBP20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 TRBC1P01850 177 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 ANPEPP15144 967 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 CTNNB1P35222 781 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 CCR2P41597 374 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 IL2P60568 153 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 PPIGQ13427 754 aaKnown RBP eCLIP20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 SQLEQ14534 574 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 JADE3Q92613 823 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 ZFYVE1Q9HBF4 777 aa20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 INTS6Q9UL03 887 aaKnown RBP20.22■□□□□ 0.83
CHRNA3-202ENST00000348639 BTN3A1O00481 513 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 NVLO15381 856 aaKnown RBP20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 KLK8O60259 260 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 GPC4O75487 556 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 IGSF6O95976 241 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 CYBBP04839 570 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 CHRM3P20309 590 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 NAA20P61599 178 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 FPGSQ05932 587 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 PPP1R3AQ16821 1122 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 CMPK2Q5EBM0 449 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 UGT3A1Q6NUS8 523 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 LARP4Q71RC2 724 aaKnown RBP eCLIP20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 PAF1Q8N7H5 531 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 GIMAP7Q8NHV1 300 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 CCDC124Q96CT7 223 aaKnown RBP20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 C19orf60Q96EN9 201 aa20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 NAF1Q96HR8 494 aaKnown RBP20.21■□□□□ 0.83
CHRNA3-202ENST00000348639 LMLNQ96KR4 655 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms