RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SOD1P00441 154 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 CD6P30203 668 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 GP5P40197 560 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 LEPRP48357 1165 aaKnown RBP26.9■■□□□ 1.9
SSBP4-202ENST00000348495 ITGA9Q13797 1035 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 SDCCAG8Q86SQ7 713 aaPredicted RBP26.9■■□□□ 1.9
SSBP4-202ENST00000348495 OTUD6BQ8N6M0 293 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 ASB12Q8WXK4 309 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 ZBTB9Q96C00 473 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 TOE1Q96GM8 510 aaKnown RBP26.9■■□□□ 1.9
SSBP4-202ENST00000348495 TCF12Q99081 682 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 PSMC3IPQ9P2W1 217 aaPredicted RBP26.9■■□□□ 1.9
SSBP4-202ENST00000348495 CTNNAL1Q9UBT7 734 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 TMPRSS11EQ9UL52 423 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 IGHV1OR15-9A0A0B4J2B8 117 aa26.89■■□□□ 1.9
SSBP4-202ENST00000348495 FAM47DPA6NHR8 397 aa26.89■■□□□ 1.9
SSBP4-202ENST00000348495 FADS2P1A8MWK0 482 aa26.89■■□□□ 1.9
SSBP4-202ENST00000348495 AHSGP02765 367 aa26.89■■□□□ 1.9
SSBP4-202ENST00000348495 INHBAP08476 426 aa26.89■■□□□ 1.9
SSBP4-202ENST00000348495 CSE1LP55060 971 aaKnown RBP26.89■■□□□ 1.9
SSBP4-202ENST00000348495 KRT71Q3SY84 523 aa26.89■■□□□ 1.9
SSBP4-202ENST00000348495 ZNF789Q5FWF6 425 aa26.89■■□□□ 1.9
SSBP4-202ENST00000348495 AARS2Q5JTZ9 985 aaKnown RBP26.89■■□□□ 1.9
SSBP4-202ENST00000348495 CERS6Q6ZMG9 384 aa26.89■■□□□ 1.9
SSBP4-202ENST00000348495 PELI3Q8N2H9 469 aa26.89■■□□□ 1.9
SSBP4-202ENST00000348495 RLN3Q8WXF3 142 aa26.89■■□□□ 1.9
SSBP4-202ENST00000348495 SLC17A9Q9BYT1 436 aa26.89■■□□□ 1.9
SSBP4-202ENST00000348495 SMIM23A6NLE4 172 aa26.88■■□□□ 1.89
SSBP4-202ENST00000348495 WSCD2Q2TBF2 565 aa26.88■■□□□ 1.89
SSBP4-202ENST00000348495 GRTP1Q5TC63 336 aa26.88■■□□□ 1.89
SSBP4-202ENST00000348495 CROCCP2Q86T23 111 aa26.88■■□□□ 1.89
SSBP4-202ENST00000348495 NXPE1Q8N323 547 aa26.88■■□□□ 1.89
SSBP4-202ENST00000348495 RIBC1Q8N443 379 aaPredicted RBP26.88■■□□□ 1.89
SSBP4-202ENST00000348495 FRMD1Q8N878 549 aa26.88■■□□□ 1.89
SSBP4-202ENST00000348495 TMEM105Q8N8V8 129 aa26.88■■□□□ 1.89
SSBP4-202ENST00000348495 RUFY1Q96T51 708 aa26.88■■□□□ 1.89
SSBP4-202ENST00000348495 RBBP8Q99708 897 aa26.88■■□□□ 1.89
SSBP4-202ENST00000348495 TXNDC16Q9P2K2 825 aa26.88■■□□□ 1.89
SSBP4-202ENST00000348495 LGALS13Q9UHV8 139 aa26.88■■□□□ 1.89
SSBP4-202ENST00000348495 IKBKGQ9Y6K9 419 aa26.88■■□□□ 1.89
SSBP4-202ENST00000348495 PLXNB3Q9ULL4 1909 aa26.88■■□□□ 1.89
SSBP4-202ENST00000348495 TLDC2A0PJX2 215 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 HAUS5O94927 633 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 TDGF1P13385 188 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 TTPAP49638 278 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 TAS2R42Q7RTR8 314 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 ZC3HC1Q86WB0 502 aaKnown RBP26.87■■□□□ 1.89
SSBP4-202ENST00000348495 SERPINA9Q86WD7 417 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 TBRG4Q969Z0 631 aaKnown RBP eCLIP26.87■■□□□ 1.899e-7■■■■■ 27.5
SSBP4-202ENST00000348495 VPS35Q96QK1 796 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 SH3GL2Q99962 352 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 FBXO6Q9NRD1 293 aaPredicted RBP26.87■■□□□ 1.89
SSBP4-202ENST00000348495 INTS10Q9NVR2 710 aaKnown RBP26.87■■□□□ 1.89
SSBP4-202ENST00000348495 CACNA1IQ9P0X4 2223 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 HMX2A2RU54 273 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 K7ESM1 405 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 AXIN1O15169 862 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 LATO43561 262 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 PAK4O96013 591 aaPredicted RBP26.87■■□□□ 1.89
SSBP4-202ENST00000348495 ACRV1P26436 265 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 PMLP29590 882 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 SGCGQ13326 291 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 DBN1Q16643 649 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 SETMARQ53H47 684 aaPredicted RBP26.87■■□□□ 1.89
SSBP4-202ENST00000348495 BMP8AQ7Z5Y6 402 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 FAM160A2Q8N612 972 aaPredicted RBP26.87■■□□□ 1.89
SSBP4-202ENST00000348495 TP53I13Q8NBR0 393 aaPredicted RBP26.87■■□□□ 1.89
SSBP4-202ENST00000348495 LPGAT1Q92604 370 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 CENPTQ96BT3 561 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 ULK4Q96C45 1275 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 KLF6Q99612 283 aaPredicted RBP26.87■■□□□ 1.89
SSBP4-202ENST00000348495 RHOJQ9H4E5 214 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 CRLS1Q9UJA2 301 aa26.87■■□□□ 1.89
SSBP4-202ENST00000348495 DOCK9Q9BZ29 2069 aa26.86■■□□□ 1.89
SSBP4-202ENST00000348495 PLXND1Q9Y4D7 1925 aa26.86■■□□□ 1.89
SSBP4-202ENST00000348495 LIMK2P53671 638 aa26.86■■□□□ 1.89
SSBP4-202ENST00000348495 RNF187Q5TA31 235 aaPredicted RBP26.86■■□□□ 1.89
SSBP4-202ENST00000348495 LYPLAL1Q5VWZ2 237 aa26.86■■□□□ 1.89
SSBP4-202ENST00000348495 CNSTQ6PJW8 725 aa26.86■■□□□ 1.89
SSBP4-202ENST00000348495 KLK6Q92876 244 aa26.86■■□□□ 1.89
SSBP4-202ENST00000348495 ACBD3Q9H3P7 528 aa26.86■■□□□ 1.89
SSBP4-202ENST00000348495 C6orf106Q9H6K1 298 aaPredicted RBP26.86■■□□□ 1.89
SSBP4-202ENST00000348495 ZDBF2Q9HCK1 2354 aa26.86■■□□□ 1.89
SSBP4-202ENST00000348495 CCDC163A0A0D9SF12 145 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 MAT2AP31153 395 aaKnown RBP26.85■■□□□ 1.89
SSBP4-202ENST00000348495 CD151P48509 253 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 SERPINB9P50453 376 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 CCR5P51681 352 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 DMWDQ09019 674 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 LRRC14Q15048 493 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 CYP4X1Q8N118 509 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 BTN2A2Q8WVV5 523 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 CNOT6Q9ULM6 557 aaKnown RBP26.85■■□□□ 1.89
SSBP4-202ENST00000348495 IGLV3-16A0A075B6K0 115 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 RAD51BO15315 384 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 ABCG1P45844 678 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 PNCKQ6P2M8 343 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 MAML2Q8IZL2 1156 aaPredicted RBP26.85■■□□□ 1.89
SSBP4-202ENST00000348495 PLA2G15Q8NCC3 412 aa26.85■■□□□ 1.89
SSBP4-202ENST00000348495 MZB1Q8WU39 189 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms