RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 FRMD7Q6ZUT3 714 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 TMEM86AQ8N2M4 240 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 SUN5Q8TC36 379 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 FATE1Q969F0 183 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 FEM1AQ9BSK4 669 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 ACSS3Q9H6R3 686 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 TBC1D17Q9HA65 648 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 SYNPO2Q9UMS6 1093 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 MDM4O15151 490 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 NKRFO15226 690 aaKnown RBP eCLIP12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 MSI1O43347 362 aaKnown RBP12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 S100A1P23297 94 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 CASP9P55211 416 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 GPR158Q5T848 1215 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 ADAMTSL2Q86TH1 951 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 TNFAIP8L1Q8WVP5 186 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 P2RY11Q96G91 374 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 MAGEL2Q9UJ55 1249 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 AGO1Q9UL18 857 aaKnown RBP12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 ST3GAL5Q9UNP4 418 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 ADM5C9JUS6 153 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 TRMUO75648 421 aaKnown RBP12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 ANGPTL1O95841 491 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 IFNGP01579 166 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 GIMD1P0DJR0 217 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 SMARCD3Q6STE5 483 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 CADM2Q8N3J6 435 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 CD84Q9UIB8 345 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 BAIAP2Q9UQB8 552 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 PLLPQ9Y342 182 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 HCN1O60741 890 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 SERPINA3P01011 423 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 NUDT17P0C025 328 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 ACADLP28330 430 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 AXLP30530 894 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 IQSEC2Q5JU85 1478 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 RNASEH2BQ5TBB1 312 aaKnown RBP12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 SLC30A6Q6NXT4 461 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 CLNKQ7Z7G1 428 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 CPSF7Q8N684 471 aaKnown RBP12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 RDH11Q8TC12 318 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 TWIST2Q8WVJ9 160 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 MTMR9Q96QG7 549 aa12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 SAMD4AQ9UPU9 718 aaKnown RBP12.11□□□□□ -0.47
SEMA6A-202ENST00000343348 A0A1W2PQ67 120 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 TNFRSF11BO00300 401 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 RSL1D1O76021 490 aaKnown RBP12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 LYNP07948 512 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 PEX2P28328 305 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 CXCR3P49682 368 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 C2orf80Q0P641 193 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 ZNF460Q14592 562 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 HECTD2Q5U5R9 776 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 ESRP1Q6NXG1 681 aaKnown RBP12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 ECHDC2Q86YB7 292 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 MREGQ8N565 214 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 CCNB1IP1Q9NPC3 277 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 NT5C1B-RDH14C9J2C7 533 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 SCAMP1O15126 338 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 XYLBO75191 536 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 RAB25P57735 213 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 RFWD3Q6PCD5 774 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 HJURPQ8NCD3 748 aaPredicted RBP12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 FAM110BQ8TC76 370 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 ACO2Q99798 780 aaKnown RBP12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 PLK2Q9NYY3 685 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 B4GALT5O43286 388 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 PTPRAP18433 802 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 CDH5P33151 784 aaPredicted RBP12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 ZNF132P52740 706 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 MPP1Q00013 466 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 KLF1Q13351 362 aaPredicted RBP12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 PLEKHG4Q58EX7 1191 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 RALGPS1Q5JS13 557 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 LCN1P1Q5VSP4 162 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 KCTD8Q6ZWB6 473 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 ATCAYQ86WG3 371 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 FAM129CQ86XR2 697 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 HOMEZQ8IX15 550 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 RAVER1Q8IY67 606 aaKnown RBP12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 GAL3ST3Q96A11 431 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 RBM4BQ9BQ04 359 aaKnown RBP12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 RBM4Q9BWF3 364 aaKnown RBP12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 PRRG4Q9BZD6 226 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 MAFFQ9ULX9 164 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 TCRBV7S2A1N4TA0A589 114 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 CCL22O00626 93 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 AMHP03971 560 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 FABP3P05413 133 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 HOXB8P17481 243 aaPredicted RBP12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 PRKCIP41743 596 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 NOMO3P69849 1222 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 MTA1Q13330 715 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 SF1Q15637 639 aaKnown RBP12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 LYPLAL1Q5VWZ2 237 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 THAP5Q7Z6K1 395 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 CBR4Q8N4T8 237 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 DNASE1L2Q92874 299 aa12.1□□□□□ -0.47
SEMA6A-202ENST00000343348 HAVCR1Q96D42 359 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms