RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 GIN1Q9NXP7 522 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 RENP00797 406 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 IGFBP5P24593 272 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 FAM83AQ86UY5 434 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 ECHDC2Q86YB7 292 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 TEX19Q8NA77 164 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 UNKLQ9H9P5 680 aaKnown RBP17.57■□□□□ 0.4
SMAD4-201ENST00000342988 BARX2Q9UMQ3 279 aaPredicted RBP17.57■□□□□ 0.4
SMAD4-201ENST00000342988 ANKRD33BA6NCL7 494 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 CLDN4O14493 209 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 RIPK2O43353 540 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 SLC35G4P0C7Q5 338 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 TLE2Q04725 743 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 TAPBPLQ9BX59 468 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 ATP13A1Q9HD20 1204 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 KIAA0100Q14667 2235 aaKnown RBP17.57■□□□□ 0.4
SMAD4-201ENST00000342988 C21orf2O43822 256 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 TREX2Q9BQ50 279 aaPredicted RBP17.57■□□□□ 0.4
SMAD4-201ENST00000342988 NARFQ9UHQ1 456 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 KLF15Q9UIH9 416 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 GPATCH8Q9UKJ3 1502 aaKnown RBP17.56■□□□□ 0.4
SMAD4-201ENST00000342988 CHADO15335 359 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 PON1P27169 355 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 CAND1Q86VP6 1230 aaKnown RBP17.56■□□□□ 0.4
SMAD4-201ENST00000342988 ZC3HC1Q86WB0 502 aaKnown RBP17.56■□□□□ 0.4
SMAD4-201ENST00000342988 ZNF527Q8NB42 609 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 TDRD3Q9H7E2 651 aaKnown RBP17.56■□□□□ 0.4
SMAD4-201ENST00000342988 SEMA4BQ9NPR2 832 aaPredicted RBP17.56■□□□□ 0.4
SMAD4-201ENST00000342988 TMEM184CQ9NVA4 438 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 ADGRE2Q9UHX3 823 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 ADAM15Q13444 863 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 TLR1Q15399 786 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 ZNF311Q5JNZ3 666 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 WDR49Q8IV35 697 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 CFAP206Q8IYR0 622 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 ACMSDQ8TDX5 336 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 QTRT2Q9H974 415 aaKnown RBP17.56■□□□□ 0.4
SMAD4-201ENST00000342988 CACNB4O00305 520 aaPredicted RBP17.56■□□□□ 0.4
SMAD4-201ENST00000342988 GYPCP04921 128 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 FXR2P51116 673 aaKnown RBP eCLIP17.56■□□□□ 0.4
SMAD4-201ENST00000342988 SERPINA13PQ6UXR4 307 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 DNAJB3Q8WWF6 145 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 FAM196BA6NMK8 535 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 MGAT1P26572 445 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 SLC26A2P50443 739 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 TKTL1P51854 596 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 HERC3Q15034 1050 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 XKR4Q5GH76 650 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 DNM1P34Q6PK57 102 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 KCNK18Q7Z418 384 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 GPR180Q86V85 440 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 ASB12Q8WXK4 309 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 ACSF2Q96CM8 615 aaPredicted RBP17.56■□□□□ 0.4
SMAD4-201ENST00000342988 OR10A4Q9H209 315 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 RNF121Q9H920 327 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 SH3PXD2BA1X283 911 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 MFSD8Q8NHS3 518 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 CPDO75976 1380 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 CLUHO75153 1309 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 PLGP00747 810 aaPredicted RBP17.56■□□□□ 0.4
SMAD4-201ENST00000342988 GSTT2P0CG29 244 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 MATKP42679 507 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 SEPHS1P49903 392 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 ALDH5A1P51649 535 aaPredicted RBP17.56■□□□□ 0.4
SMAD4-201ENST00000342988 ARFRP1Q13795 201 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 CA9Q16790 459 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 ANKRD13AQ8IZ07 590 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 RNF148Q8N7C7 305 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 SH3BGRLO75368 114 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 ZNF157P51786 506 aaPredicted RBP17.56■□□□□ 0.4
SMAD4-201ENST00000342988 S100A10P60903 97 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 GRM3Q14832 879 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 TFAP2DQ7Z6R9 452 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 PNPT1Q8TCS8 783 aaKnown RBP17.56■□□□□ 0.4
SMAD4-201ENST00000342988 LRMDAQ9H2I8 198 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 BRD9Q9H8M2 597 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 ABCB9Q9NP78 766 aa17.56■□□□□ 0.4
SMAD4-201ENST00000342988 TBC1D3BA6NDS4 549 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 ADAMTS3O15072 1205 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 YES1P07947 543 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 MAPK3P27361 379 aaPredicted RBP17.55■□□□□ 0.4
SMAD4-201ENST00000342988 CLCN7P51798 805 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 DCST1Q5T197 706 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 MPZL3Q6UWV2 235 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 PCDHGB6Q9Y5F9 930 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 ARHGEF17Q96PE2 2063 aaPredicted RBP17.55■□□□□ 0.4
SMAD4-201ENST00000342988 ILVBLA1L0T0 632 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 SLC30A10Q6XR72 485 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 CREB3L1Q96BA8 519 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 DCP1AQ9NPI6 582 aaPredicted RBP17.55■□□□□ 0.4
SMAD4-201ENST00000342988 HEG1Q9ULI3 1381 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 GRK6P43250 576 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 ZNF627Q7L945 461 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 PARGQ86W56 976 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 ELAC1Q9H777 363 aaKnown RBP17.55■□□□□ 0.4
SMAD4-201ENST00000342988 PLD2O14939 933 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 CERCAMQ5T4B2 595 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 CNDP2Q96KP4 475 aaKnown RBP17.55■□□□□ 0.4
SMAD4-201ENST00000342988 PCDHB5Q9Y5E4 795 aa17.55■□□□□ 0.4
SMAD4-201ENST00000342988 SLC22A3O75751 556 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms