RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 BAP1Q92560 729 aa16.9■□□□□ 0.3
CDK11B-201ENST00000340677 ELP4Q96EB1 424 aa16.9■□□□□ 0.3
CDK11B-201ENST00000340677 HHIPL1Q96JK4 782 aa16.9■□□□□ 0.3
CDK11B-201ENST00000340677 RIPOR3Q96MK2 946 aa16.9■□□□□ 0.3
CDK11B-201ENST00000340677 GCOM2Q9BZD3 368 aaPredicted RBP16.9■□□□□ 0.3
CDK11B-201ENST00000340677 TOR3AQ9H497 397 aa16.9■□□□□ 0.3
CDK11B-201ENST00000340677 PDLIM7Q9NR12 457 aa16.9■□□□□ 0.3
CDK11B-201ENST00000340677 KLHL9Q9P2J3 617 aa16.9■□□□□ 0.3
CDK11B-201ENST00000340677 SIP14410 1827 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 HACD1B0YJ81 288 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 PRR5-ARHGAP8B1AHC4 643 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 SLC22A2O15244 555 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 SLC16A3O15427 465 aaKnown RBP16.89■□□□□ 0.29
CDK11B-201ENST00000340677 DGAT1O75907 488 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 DHFRP00374 187 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 SLC10A3P09131 477 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 KPNA2P52292 529 aaKnown RBP16.89■□□□□ 0.29
CDK11B-201ENST00000340677 CARD18P57730 90 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 ABCE1P61221 599 aaKnown RBP16.89■□□□□ 0.29
CDK11B-201ENST00000340677 ARID5AQ03989 594 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 TYW3Q6IPR3 259 aaKnown RBP16.89■□□□□ 0.29
CDK11B-201ENST00000340677 KDM1BQ8NB78 822 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 HM13Q8TCT9 377 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 RNF170Q96K19 258 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 MFSD14AQ96MC6 490 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 ACTR6Q9GZN1 396 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 AP5M1Q9H0R1 490 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 ASB7Q9H672 318 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 ZNF302Q9NR11 478 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 CHTOPQ9Y3Y2 248 aaKnown RBP16.89■□□□□ 0.29
CDK11B-201ENST00000340677 SLC15A5A6NIM6 579 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 CSF2RAP15509 400 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 ATXN1P54253 815 aaKnown RBP16.89■□□□□ 0.29
CDK11B-201ENST00000340677 PLIN5Q00G26 463 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 KCNC3Q14003 757 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 GPR68Q15743 365 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 MANEAQ5SRI9 462 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 LETMD1Q6P1Q0 360 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 GORASP2Q9H8Y8 452 aa16.89■□□□□ 0.29
CDK11B-201ENST00000340677 AGO3Q9H9G7 860 aaKnown RBP16.89■□□□□ 0.29
CDK11B-201ENST00000340677 CROCCQ5TZA2 2017 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 CCDC188H7C350 402 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 PGRMC1O00264 195 aaKnown RBP16.88■□□□□ 0.29
CDK11B-201ENST00000340677 GPR171O14626 319 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 MBL2P11226 248 aaPredicted RBP16.88■□□□□ 0.29
CDK11B-201ENST00000340677 ITGA4P13612 1032 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 ADORA2AP29274 412 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 CSKP41240 450 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 ZNF157P51786 506 aaPredicted RBP16.88■□□□□ 0.29
CDK11B-201ENST00000340677 RAD23AP54725 363 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 EFR3AQ14156 821 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 CELF3Q5SZQ8 465 aaKnown RBP16.88■□□□□ 0.29
CDK11B-201ENST00000340677 TRABD2AQ86V40 505 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 DPP10Q8N608 796 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 ARFGAP1Q8N6T3 406 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 EFHD1Q9BUP0 239 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 DNAJC28Q9NX36 388 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 THUMPD1Q9NXG2 353 aaKnown RBP16.88■□□□□ 0.29
CDK11B-201ENST00000340677 IPPQ9Y573 584 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 KCNK3O14649 394 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 ULK1O75385 1050 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 PRG2P13727 222 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 ITGB6P18564 788 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 SLC15A1P46059 708 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 LIPEQ05469 1076 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 CUL2Q13617 745 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 AGAP6Q5VW22 663 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 FUT10Q6P4F1 479 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 FRMD5Q7Z6J6 570 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 PLEKHH3Q7Z736 793 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 C12orf40Q86WS4 652 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 SLC9A9Q8IVB4 645 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 SIX6OS1Q8N1H7 587 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 OR4M1Q8NGD0 313 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 OR2T34Q8NGX1 318 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 TSPEARQ8WU66 669 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 SIPA1Q96FS4 1042 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 KLHL32Q96NJ5 620 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 AGAP4Q96P64 663 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 MENTQ9BUN1 341 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 PAPOLGQ9BWT3 736 aaKnown RBP16.88■□□□□ 0.29
CDK11B-201ENST00000340677 SLC13A1Q9BZW2 595 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 ESRP2Q9H6T0 727 aaKnown RBP16.88■□□□□ 0.29
CDK11B-201ENST00000340677 BCAS3Q9H6U6 928 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 SMOXQ9NWM0 555 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 HSPBP1Q9NZL4 362 aa16.88■□□□□ 0.29
CDK11B-201ENST00000340677 A0A1B0GV90 55 aa16.87■□□□□ 0.29
CDK11B-201ENST00000340677 ACOD1A6NK06 481 aa16.87■□□□□ 0.29
CDK11B-201ENST00000340677 CES2O00748 559 aa16.87■□□□□ 0.29
CDK11B-201ENST00000340677 SPAG6O75602 509 aa16.87■□□□□ 0.29
CDK11B-201ENST00000340677 GGPS1O95749 300 aa16.87■□□□□ 0.29
CDK11B-201ENST00000340677 POU3F3P20264 500 aaPredicted RBP16.87■□□□□ 0.29
CDK11B-201ENST00000340677 CTHP32929 405 aa16.87■□□□□ 0.29
CDK11B-201ENST00000340677 SPCS3P61009 180 aa16.87■□□□□ 0.29
CDK11B-201ENST00000340677 TTLL4Q14679 1199 aa16.87■□□□□ 0.29
CDK11B-201ENST00000340677 SMAD2Q15796 467 aaKnown RBP16.87■□□□□ 0.29
CDK11B-201ENST00000340677 ASTE1Q2TB18 679 aaPredicted RBP16.87■□□□□ 0.29
CDK11B-201ENST00000340677 DNAL1Q4LDG9 190 aa16.87■□□□□ 0.29
CDK11B-201ENST00000340677 TCTE1Q5JU00 501 aa16.87■□□□□ 0.29
CDK11B-201ENST00000340677 DPY19L3Q6ZPD9 716 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms