RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 TOR4AQ9NXH8 423 aa15.14■□□□□ 0.01
UBE3B-201ENST00000340074 KCTD3Q9Y597 815 aa15.14■□□□□ 0.01
UBE3B-201ENST00000340074 SAR1BQ9Y6B6 198 aa15.14■□□□□ 0.01
UBE3B-201ENST00000340074 OAS3Q9Y6K5 1087 aaKnown RBP15.14■□□□□ 0.01
UBE3B-201ENST00000340074 RP1P56715 2156 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 GOLGA6L10A0A0M3HER8 536 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 LMO7DNF2Z398 122 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 YY2O15391 372 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 PHF2O75151 1096 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 SUN1O94901 812 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 SLC25A14O95258 325 aaPredicted RBP15.13■□□□□ 0.01
UBE3B-201ENST00000340074 ASMTLO95671 621 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 CRTAMO95727 393 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 SPAM1P38567 509 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 GRIA1P42261 906 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 GNPDA1P46926 289 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 BASP1P80723 227 aaKnown RBP15.13■□□□□ 0.01
UBE3B-201ENST00000340074 DNAJC3Q13217 504 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 TRIP13Q15645 432 aaPredicted RBP15.13■□□□□ 0.01
UBE3B-201ENST00000340074 PROX2Q3B8N5 592 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 ATP13A5Q4VNC0 1218 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 PDPK2PQ6A1A2 396 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 FAM151BQ6UXP7 276 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 C4orf22Q6V702 233 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 CREG2Q8IUH2 290 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 FSTL5Q8N475 847 aaPredicted RBP15.13■□□□□ 0.01
UBE3B-201ENST00000340074 OR4K2Q8NGD2 314 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 GLYATL1Q969I3 302 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 ASXL3Q9C0F0 2248 aa15.13■□□□□ 0.01
UBE3B-201ENST00000340074 GLYATL1P3A0A0U1RQE8 302 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 MED19A0JLT2 244 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-201ENST00000340074 TPP1O14773 563 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 LDB2O43679 373 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 PPFIA2O75334 1257 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 KRT14P02533 472 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 IVLP07476 585 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 ANXA6P08133 673 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 FTH1P19P0C7X4 201 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 MYF5P13349 255 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 VPS41P49754 854 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 PDE1BQ01064 536 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 POU6F1Q14863 301 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 CHRNA6Q15825 494 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 ZNF648Q5T619 568 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-201ENST00000340074 ZCCHC8Q6NZY4 707 aaKnown RBP15.12■□□□□ 0.01
UBE3B-201ENST00000340074 PPP1R21Q6ZMI0 780 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 MARK2Q7KZI7 788 aaKnown RBP15.12■□□□□ 0.01
UBE3B-201ENST00000340074 SLCO6A1Q86UG4 719 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 GKN2Q86XP6 184 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 PNPLA1Q8N8W4 532 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 DNAAF3Q8N9W5 541 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 OR13C4Q8NGS5 318 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 CCL4L1Q8NHW4 92 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 SCARF2Q96GP6 870 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-201ENST00000340074 APOLD1Q96LR9 279 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 VPS35Q96QK1 796 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 TMPRSS11EQ9UL52 423 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 DOLKQ9UPQ8 538 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 PIKFYVEQ9Y2I7 2098 aa15.12■□□□□ 0.01
UBE3B-201ENST00000340074 GAPDHSO14556 408 aaPredicted RBP15.11■□□□□ 0.01
UBE3B-201ENST00000340074 GPR39O43194 453 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 FNTAP49354 379 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 ZNF140P52738 457 aaPredicted RBP15.11■□□□□ 0.01
UBE3B-201ENST00000340074 TERF1P54274 439 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 TMPRSS15P98073 1019 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 CDH17Q12864 832 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 GPS1Q13098 491 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 SEPT6Q14141 434 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 C6orf132Q5T0Z8 1188 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 TAF8Q7Z7C8 310 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 PHYKPLQ8IUZ5 450 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 SDR16C5Q8N3Y7 309 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 FAM181AQ8N9Y4 354 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 DTX3LQ8TDB6 740 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 TRIM39Q9HCM9 518 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 CASS4Q9NQ75 786 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 EIF2B3Q9NR50 452 aaKnown RBP15.11■□□□□ 0.01
UBE3B-201ENST00000340074 VPS18Q9P253 973 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 ATXN10Q9UBB4 475 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 FKBPLQ9UIM3 349 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 NEU2Q9Y3R4 380 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 GPSM3Q9Y4H4 160 aa15.11■□□□□ 0.01
UBE3B-201ENST00000340074 PCYT1BQ9Y5K3 369 aaPredicted RBP15.11■□□□□ 0.01
UBE3B-201ENST00000340074 UGT1A9O60656 530 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 DNAJC6O75061 913 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 PRAMEF1O95521 474 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 ADRB1P08588 477 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 CKMT2P17540 419 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 UGT1A6P19224 532 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 UGT1A1P22309 533 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 UGT1A4P22310 534 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 CA5AP35218 305 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 UGT1A3P35503 534 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 UGT1A5P35504 534 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 ADCY8P40145 1251 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 ETF1P62495 437 aaKnown RBP15.1■□□□□ 0.01
UBE3B-201ENST00000340074 KHDC1Q4VXA5 237 aaKnown RBP15.1■□□□□ 0.01
UBE3B-201ENST00000340074 CCDC38Q502W7 563 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 PYCR3Q53H96 274 aa15.1■□□□□ 0.01
UBE3B-201ENST00000340074 CCDC157Q569K6 752 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms