RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 PDP2Q9P2J9 529 aa15.52■□□□□ 0.08
LINC01116-202ENST00000339037 PILRAQ9UKJ1 303 aa15.52■□□□□ 0.08
LINC01116-202ENST00000339037 PRRC2CQ9Y520 2896 aaKnown RBP15.52■□□□□ 0.07
LINC01116-202ENST00000339037 USP9XQ93008 2570 aaPredicted RBP15.51■□□□□ 0.07
LINC01116-202ENST00000339037 SPTAN1Q13813 2472 aaKnown RBP15.51■□□□□ 0.07
LINC01116-202ENST00000339037 TRBV23OR9-2A0A075B6M9 112 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 A0A0J9YYE9 177 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 SMAPO00193 183 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 INPP4BO15327 924 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 FZD6O60353 706 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 TRBC1P01850 177 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 RARAP10276 462 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 SKILP12757 684 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 MAN1A1P33908 653 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 EPHB1P54762 984 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 HHEXQ03014 270 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 PTSQ03393 145 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 ITKQ08881 620 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 KLHL30Q0D2K2 578 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 NR1I3Q14994 352 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 COLEC12Q5KU26 742 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 SNAP47Q5SQN1 464 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 WDR74Q6RFH5 385 aaPredicted RBP15.51■□□□□ 0.07
LINC01116-202ENST00000339037 NLRP8Q86W28 1048 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 NLGN4XQ8N0W4 816 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 NLGN4YQ8NFZ3 816 aaPredicted RBP15.51■□□□□ 0.07
LINC01116-202ENST00000339037 EXD1Q8NHP7 514 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 RTP4Q96DX8 246 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 COX14Q96I36 57 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 SMIM14Q96QK8 99 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 AGAP2Q99490 1192 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 STN1Q9H668 368 aaKnown RBP15.51■□□□□ 0.07
LINC01116-202ENST00000339037 PCDH18Q9HCL0 1135 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 DNPEPQ9ULA0 475 aa15.51■□□□□ 0.07
LINC01116-202ENST00000339037 SYCE3A1L190 88 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 A8MU76 341 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 ASMTLO95671 621 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 EML2O95834 649 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 SERPINC1P01008 464 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 PRKAR1AP10644 381 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 STC1P52823 247 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 PIGHQ14442 188 aaPredicted RBP15.5■□□□□ 0.07
LINC01116-202ENST00000339037 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.5■□□□□ 0.07
LINC01116-202ENST00000339037 TXNRD3NBQ6F5E7 133 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 LRRC49Q8IUZ0 686 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.5■□□□□ 0.07
LINC01116-202ENST00000339037 TEX26Q8N6G2 289 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 TEKT4Q8WW24 435 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 CTRCQ99895 268 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 ZPBPQ9BS86 351 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 RIOK2Q9BVS4 552 aaKnown RBP15.5■□□□□ 0.07
LINC01116-202ENST00000339037 EPN3Q9H201 632 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 SARS2Q9NP81 518 aaKnown RBP15.5■□□□□ 0.07
LINC01116-202ENST00000339037 VPS18Q9P253 973 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 ZNHIT2Q9UHR6 403 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 PRKAB1Q9Y478 270 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 TTLL3Q9Y4R7 772 aa15.5■□□□□ 0.07
LINC01116-202ENST00000339037 ZFC3H1O60293 1989 aaKnown RBP15.49■□□□□ 0.07
LINC01116-202ENST00000339037 NKX2-8O15522 239 aa15.49■□□□□ 0.07
LINC01116-202ENST00000339037 ATP1A1P05023 1023 aaKnown RBP15.49■□□□□ 0.07
LINC01116-202ENST00000339037 MAP4P27816 1152 aaKnown RBP15.49■□□□□ 0.07
LINC01116-202ENST00000339037 MC2RQ01718 297 aa15.49■□□□□ 0.07
LINC01116-202ENST00000339037 SRSF1Q07955 248 aaKnown RBP eCLIP15.49■□□□□ 0.07
LINC01116-202ENST00000339037 NFATC2Q13469 925 aa15.49■□□□□ 0.07
LINC01116-202ENST00000339037 KRT81Q14533 505 aa15.49■□□□□ 0.07
LINC01116-202ENST00000339037 SKIDA1Q1XH10 827 aa15.49■□□□□ 0.07
LINC01116-202ENST00000339037 CEACAM20Q6UY09 585 aa15.49■□□□□ 0.07
LINC01116-202ENST00000339037 CHST15Q7LFX5 561 aaPredicted RBP15.49■□□□□ 0.07
LINC01116-202ENST00000339037 ARHGAP22Q7Z5H3 698 aa15.49■□□□□ 0.07
LINC01116-202ENST00000339037 LUZP1Q86V48 1076 aa15.49■□□□□ 0.07
LINC01116-202ENST00000339037 C9orf43Q8TAL5 461 aaPredicted RBP15.49■□□□□ 0.07
LINC01116-202ENST00000339037 NCSTNQ92542 709 aa15.49■□□□□ 0.07
LINC01116-202ENST00000339037 EFHD1Q9BUP0 239 aa15.49■□□□□ 0.07
LINC01116-202ENST00000339037 TDRD1Q9BXT4 1180 aaKnown RBP15.49■□□□□ 0.07
LINC01116-202ENST00000339037 ISCUQ9H1K1 167 aa15.49■□□□□ 0.07
LINC01116-202ENST00000339037 CBX8Q9HC52 389 aa15.49■□□□□ 0.07
LINC01116-202ENST00000339037 HAUS2Q9NVX0 235 aa15.49■□□□□ 0.07
LINC01116-202ENST00000339037 RCOR3Q9P2K3 495 aaPredicted RBP15.49■□□□□ 0.07
LINC01116-202ENST00000339037 TBC1D29Q9UFV1 150 aa15.49■□□□□ 0.07
LINC01116-202ENST00000339037 RP1L1Q8IWN7 2480 aaPredicted RBP15.49■□□□□ 0.07
LINC01116-202ENST00000339037 MFSD11O43934 449 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 DNAJC6O75061 913 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 SLC2A4P14672 509 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 CA4P22748 312 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 CES1P23141 567 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 PBX1P40424 430 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 CASRP41180 1078 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 GARSP41250 739 aaKnown RBP15.48■□□□□ 0.07
LINC01116-202ENST00000339037 MAPK9P45984 424 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 NOP2P46087 812 aaKnown RBP15.48■□□□□ 0.07
LINC01116-202ENST00000339037 DSC2Q02487 901 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 SLC25A11Q02978 314 aaKnown RBP15.48■□□□□ 0.07
LINC01116-202ENST00000339037 CDC20Q12834 499 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 FIGNQ5HY92 759 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 HGSNATQ68CP4 663 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 ALG1LQ6GMV1 187 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 IYDQ6PHW0 289 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 KDELC2Q7Z4H8 507 aa15.48■□□□□ 0.07
LINC01116-202ENST00000339037 RAVER1Q8IY67 606 aaKnown RBP15.48■□□□□ 0.07
LINC01116-202ENST00000339037 UNC5BQ8IZJ1 945 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms