RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 GTSE1Q9NYZ3 720 aa11.04□□□□□ -0.64
LRP1-202ENST00000338962 CDH7Q9ULB5 785 aa11.04□□□□□ -0.64
LRP1-202ENST00000338962 CDYLQ9Y232 598 aa11.04□□□□□ -0.64
LRP1-202ENST00000338962 FNDC3AQ9Y2H6 1198 aaKnown RBP11.04□□□□□ -0.64
LRP1-202ENST00000338962 L3MBTL1Q9Y468 752 aa11.04□□□□□ -0.64
LRP1-202ENST00000338962 COL6A3P12111 3177 aa11.04□□□□□ -0.64
LRP1-202ENST00000338962 K7ERQ8 282 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 ZBTB14O43829 449 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 ENTPD5O75356 428 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 SRP72O76094 671 aaKnown RBP11.03□□□□□ -0.64
LRP1-202ENST00000338962 RHOBTB1O94844 696 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 HNRNPLP14866 589 aaKnown RBP eCLIP11.03□□□□□ -0.645e-11■■■■■ 33.3
LRP1-202ENST00000338962 CEBPBP17676 345 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 PSMA3P25788 255 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 MC4RP32245 332 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 TTPAP49638 278 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 PDCD2Q16342 344 aaPredicted RBP11.03□□□□□ -0.64
LRP1-202ENST00000338962 ARMC12Q5T9G4 340 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 APCDD1Q8J025 514 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 AFAP1L2Q8N4X5 818 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 SH3RF2Q8TEC5 729 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 SH3GL3Q99963 347 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 SYTL2Q9HCH5 934 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 PRDM6Q9NQX0 595 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 FKBPLQ9UIM3 349 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 FAM50BQ9Y247 325 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 PKP3Q9Y446 797 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 MTF2Q9Y483 593 aaPredicted RBP11.03□□□□□ -0.64
LRP1-202ENST00000338962 ANKRD36A6QL64 1941 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 MEI4A8MW99 385 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 LEFTY2O00292 366 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 LIN7AO14910 233 aaPredicted RBP11.03□□□□□ -0.64
LRP1-202ENST00000338962 GRID2O43424 1007 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 MAGEC1O60732 1142 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 SMIM24O75264 130 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 LMNAP02545 664 aaKnown RBP11.03□□□□□ -0.64
LRP1-202ENST00000338962 CYBBP04839 570 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 CD1DP15813 335 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 GM2AP17900 193 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 FMO4P31512 558 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 MAPK8P45983 427 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 CCNG1P51959 295 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 TFF2Q03403 129 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 AARS2Q5JTZ9 985 aaKnown RBP11.03□□□□□ -0.64
LRP1-202ENST00000338962 METTL3Q86U44 580 aaKnown RBP11.03□□□□□ -0.64
LRP1-202ENST00000338962 CMTM8Q8IZV2 173 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 PHTF2Q8N3S3 785 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 POU5F2Q8N7G0 328 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 OR6K2Q8NGY2 324 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 MYO19Q96H55 970 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 ZSWIM3Q96MP5 696 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 PHF7Q9BWX1 381 aaPredicted RBP11.03□□□□□ -0.64
LRP1-202ENST00000338962 GPR63Q9BZJ6 419 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 RNPEPL1Q9HAU8 725 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 TRPV4Q9HBA0 871 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 BPIFA1Q9NP55 256 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 KIAA1522Q9P206 1035 aaPredicted RBP11.03□□□□□ -0.64
LRP1-202ENST00000338962 EPS15L1Q9UBC2 864 aa11.03□□□□□ -0.64
LRP1-202ENST00000338962 TRPC5OSA6NMA1 111 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 TMEM233B4DJY2 109 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 SMAD6O43541 496 aaKnown RBP11.02□□□□□ -0.65
LRP1-202ENST00000338962 FZD6O60353 706 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 PEX11AO75192 247 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 PGLSO95336 258 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 LAMP2P13473 410 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 TIAL1Q01085 375 aaKnown RBP eCLIP11.02□□□□□ -0.65
LRP1-202ENST00000338962 LMAN2Q12907 356 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 PTPRNQ16849 979 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 AAK1Q2M2I8 961 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 LSM12Q3MHD2 195 aaKnown RBP11.02□□□□□ -0.65
LRP1-202ENST00000338962 ZRANB3Q5FWF4 1079 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 NXNQ6DKJ4 435 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 PTCRAQ6ISU1 281 aaPredicted RBP11.02□□□□□ -0.65
LRP1-202ENST00000338962 PSAPL1Q6NUJ1 521 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 FRMD7Q6ZUT3 714 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 GET4Q7L5D6 327 aaPredicted RBP11.02□□□□□ -0.65
LRP1-202ENST00000338962 CAMK1DQ8IU85 385 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 KDM1BQ8NB78 822 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 CFAP61Q8NHU2 1237 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 STON2Q8WXE9 905 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 EXT2Q93063 718 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 PTERQ96BW5 349 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 ASB16Q96NS5 453 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 MYADMQ96S97 322 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 THTPAQ9BU02 230 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 TRMOQ9BU70 441 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 OSBPL1AQ9BXW6 950 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 SMG9Q9H0W8 520 aaKnown RBP11.02□□□□□ -0.65
LRP1-202ENST00000338962 ETAA1Q9NY74 926 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 THEGQ9P2T0 379 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 ZNF711Q9Y462 761 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.02□□□□□ -0.65
LRP1-202ENST00000338962 NOTCH4Q99466 2003 aa11.02□□□□□ -0.65
LRP1-202ENST00000338962 LOC100653049A0A140TA62 436 aa11.01□□□□□ -0.65
LRP1-202ENST00000338962 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.01□□□□□ -0.65
LRP1-202ENST00000338962 H7C0S8 307 aa11.01□□□□□ -0.65
LRP1-202ENST00000338962 KRT34O76011 436 aa11.01□□□□□ -0.65
LRP1-202ENST00000338962 TM7SF2O76062 418 aa11.01□□□□□ -0.65
LRP1-202ENST00000338962 PENKP01210 267 aaPredicted RBP11.01□□□□□ -0.65
LRP1-202ENST00000338962 JUNP05412 331 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms