RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 TMEM181Q9P2C4 612 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 ABCD2Q9UBJ2 740 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 MTRRQ9UBK8 725 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 FBXL21Q9UKT6 434 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 DMTF1Q9Y222 760 aa10.76□□□□□ -0.69
RTN3-201ENST00000338850 LOC285095A0A1B0GVY8 99 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 ARHGAP10A1A4S6 786 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 CAPN8A6NHC0 703 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 ANHXE9PGG2 379 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 PSMD12O00232 456 aaPredicted RBP10.75□□□□□ -0.69
RTN3-201ENST00000338850 NEMP1O14524 444 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 RTN3O95197 1032 aaPredicted RBP10.75□□□□□ -0.69
RTN3-201ENST00000338850 MT-CYBP00156 380 aaPredicted RBP10.75□□□□□ -0.69
RTN3-201ENST00000338850 C8AP07357 584 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 SNRPB2P08579 225 aaKnown RBP10.75□□□□□ -0.69
RTN3-201ENST00000338850 HNRNPA1P09651 372 aaKnown RBP eCLIP10.75□□□□□ -0.69
RTN3-201ENST00000338850 FAM58BPP0C7Q3 252 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 ZCCHC18P0CG32 403 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 LAMP2P13473 410 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 HSD17B1P14061 328 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 BDNFP23560 247 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 HOXA9P31269 272 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 OR1D2P34982 312 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 GMPRP36959 345 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 DPP6P42658 865 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 MAPKAPK2P49137 400 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 SLC5A3P53794 718 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 NR1H2P55055 460 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 NTHL1P78549 312 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 MRPS22P82650 360 aaKnown RBP10.75□□□□□ -0.69
RTN3-201ENST00000338850 RING1Q06587 406 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 IL10RBQ08334 325 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 CTBP1Q13363 440 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 HTR4Q13639 388 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 RAB33AQ14088 237 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 MAP7Q14244 749 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 FASTKQ14296 549 aaKnown RBP10.75□□□□□ -0.69
RTN3-201ENST00000338850 NFE2Q16621 373 aaPredicted RBP10.75□□□□□ -0.69
RTN3-201ENST00000338850 PARP15Q460N3 678 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 PPM1LQ5SGD2 360 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 HECTD2Q5U5R9 776 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 REP15Q6BDI9 236 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 OVOS1Q6IE37 1185 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 OGFOD2Q6N063 350 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 RWDD4Q6NW29 188 aaKnown RBP10.75□□□□□ -0.69
RTN3-201ENST00000338850 CNSTQ6PJW8 725 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 RSPO2Q6UXX9 243 aaPredicted RBP10.75□□□□□ -0.69
RTN3-201ENST00000338850 LARP4Q71RC2 724 aaKnown RBP eCLIP10.75□□□□□ -0.69
RTN3-201ENST00000338850 GRASPQ7Z6J2 395 aaPredicted RBP10.75□□□□□ -0.69
RTN3-201ENST00000338850 SCD5Q86SK9 330 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 MON1AQ86VX9 555 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 SIX5Q8N196 739 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 ANKFN1Q8N957 763 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 PCYOX1LQ8NBM8 494 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 NETO2Q8NC67 525 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 OR13J1Q8NGT2 312 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 SPATA22Q8NHS9 363 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 CELF6Q96J87 481 aaKnown RBP10.75□□□□□ -0.69
RTN3-201ENST00000338850 HOPXQ9BPY8 73 aaPredicted RBP10.75□□□□□ -0.69
RTN3-201ENST00000338850 HAUS8Q9BT25 410 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 TRIM15Q9C019 465 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 ZYG11BQ9C0D3 744 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 NOL6Q9H6R4 1146 aaKnown RBP10.75□□□□□ -0.69
RTN3-201ENST00000338850 NDUFAF1Q9Y375 327 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 HS3ST4Q9Y661 456 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 DOCK8Q8NF50 2099 aa10.75□□□□□ -0.69
RTN3-201ENST00000338850 TYW5A2RUC4 315 aaKnown RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 KRBA1A5PL33 1030 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 TRIM64CA6NLI5 447 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 DRGXA6NNA5 263 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 PI15O43692 258 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 NRP2O60462 931 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 ZMPSTE24O75844 475 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 SRP72O76094 671 aaKnown RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 SORBS2O94875 1100 aaKnown RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 OAZ2O95190 189 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 STAMBPO95630 424 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 CLPTM1O96005 669 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 IGLV3-27P01718 113 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 POU2F2P09086 479 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 SRFP11831 508 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 BMP2P12643 396 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 ENO3P13929 434 aaPredicted RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 ZNF26P17031 533 aaPredicted RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 FSHRP23945 695 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 PMLP29590 882 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 GRIA2P42262 883 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 BRCC3P46736 316 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 GLRBP48167 497 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 STX1BP61266 288 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 HERVK_113P63132 956 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 MS4A2Q01362 244 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 PDCD2Q16342 344 aaPredicted RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 TYSND1Q2T9J0 566 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 C5orf22Q49AR2 442 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 PABPC1LQ4VXU2 614 aaKnown RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 TMEM259Q4ZIN3 620 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 ZNF678Q5SXM1 525 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 INTS11Q5TA45 600 aaKnown RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 ARHGAP36Q6ZRI8 547 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms