RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 ARL14EPQ8N8R7 260 aaPredicted RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 L3MBTL4Q8NA19 623 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 TDRD5Q8NAT2 981 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 ANKRD49Q8WVL7 239 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 TACO1Q9BSH4 297 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 RTKNQ9BST9 563 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 GATA5Q9BWX5 397 aaPredicted RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 PRDM9Q9NQV7 894 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 CLEC1BQ9P126 229 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 SLC17A6Q9P2U8 582 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 SUN2Q9UH99 717 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 TRPS1Q9UHF7 1281 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 PCTPQ9UKL6 214 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 IFRD1O00458 451 aaPredicted RBP5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 SDHDO14521 159 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 GJB3O75712 270 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 IGSF6O95976 241 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 LRG1P02750 347 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 PYGLP06737 847 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 EPORP19235 508 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 GABRR2P28476 465 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 CA5AP35218 305 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 PKNOX1P55347 436 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 MPP1Q00013 466 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 C2orf27AQ580R0 203 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 RBM20Q5T481 1227 aaKnown RBP5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 C9orf64Q5T6V5 341 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 AGAP9Q5VTM2 703 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 RWDD4Q6NW29 188 aaKnown RBP5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 RFWD3Q6PCD5 774 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 SYCE2Q6PIF2 218 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 NET1Q7Z628 596 aaPredicted RBP5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 CIR1Q86X95 450 aaPredicted RBP5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 TICAM1Q8IUC6 712 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 DENND6AQ8IWF6 608 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 CACTIN-AS1Q8N1I8 211 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 TCAIMQ8N3R3 496 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 MAB21L3Q8N8X9 362 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 SH3RF2Q8TEC5 729 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 DNASE1L2Q92874 299 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 NXPE3Q969Y0 559 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 TBC1D20Q96BZ9 403 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 ASIC4Q96FT7 647 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 TBATAQ96M53 351 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 PRRX2Q99811 253 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 TMEM120AQ9BXJ8 343 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 ATP13A3Q9H7F0 1226 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 SYTL2Q9HCH5 934 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 SLCO1B3Q9NPD5 702 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 GKN1Q9NS71 199 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 DNAJC17Q9NVM6 304 aaKnown RBP5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 PRPF19Q9UMS4 504 aaKnown RBP5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 CCL26Q9Y258 94 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 DYTNA2CJ06 578 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 C2orf81A6NN90 581 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 PRR33A8MZF0 331 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 H0YJX3 145 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 TRIM24O15164 1050 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 KCNJ13O60928 360 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 UBOX5O94941 541 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 TROVE2P10155 538 aaKnown RBP eCLIP5.32□□□□□ -1.564e-10■■□□□ 14.4
PRPF4B-201ENST00000337659 RALBP11234 206 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 PABPC1P11940 636 aaKnown RBP5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 ENO3P13929 434 aaPredicted RBP5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 BPIP17213 487 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 HDCP19113 662 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 LHCGRP22888 699 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 PRLHRP49683 370 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 HK3P52790 923 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 CRADDP78560 199 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 STX3Q13277 289 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 CNGA3Q16281 694 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 AAK1Q2M2I8 961 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 TXNDC8Q6A555 127 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 DPP10Q8N608 796 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 GPR152Q8TDT2 470 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 TIFAQ96CG3 184 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 TMA16Q96EY4 203 aaKnown RBP5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 DNAJC1Q96KC8 554 aaKnown RBP5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 C17orf80Q9BSJ5 609 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 SLC29A3Q9BZD2 475 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 PITHD1Q9GZP4 211 aaPredicted RBP5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 RSPH9Q9H1X1 276 aaPredicted RBP5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 EHD1Q9H4M9 534 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 ZBTB26Q9HCK0 441 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 ZDHHC3Q9NYG2 299 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 CFAP97Q9P2B7 532 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 THEGQ9P2T0 379 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 CD300AQ9UGN4 299 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 LIMD1Q9UGP4 676 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 ZNF225Q9UK10 706 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 ARL5AQ9Y689 179 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 TRBV5-3A0A0A0MS03 114 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 SLC5A10A0PJK1 596 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 BBIP1A8MTZ0 92 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 AURKAO14965 403 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 HDAC3O15379 428 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 SPAG7O75391 227 aa5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 ENO1P06733 434 aaKnown RBP5.32□□□□□ -1.56
PRPF4B-201ENST00000337659 PDHA1P08559 390 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms