RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 TKTL2Q9H0I9 626 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 PDP1Q9P0J1 537 aaPredicted RBP13.19□□□□□ -0.3
COL2A1-201ENST00000337299 MAP10Q9P2G4 905 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 RABL2AQ9UBK7 228 aaPredicted RBP13.19□□□□□ -0.3
COL2A1-201ENST00000337299 SPASTQ9UBP0 616 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 VWA7Q9Y334 891 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 MOXD2PA6NHM9 499 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 M0QX08 132 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 GAS2O43903 313 aaKnown RBP13.19□□□□□ -0.3
COL2A1-201ENST00000337299 MT-CYBP00156 380 aaPredicted RBP13.19□□□□□ -0.3
COL2A1-201ENST00000337299 ARHGEF7Q14155 803 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 TCEAL1Q15170 157 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 OR8H3Q8N146 312 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 TSPAN18Q96SJ8 248 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 FTHL17Q9BXU8 183 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 ARHGEF4Q9NR80 690 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 HMGXB4Q9UGU5 601 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 ZNHIT2Q9UHR6 403 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 NENFQ9UMX5 172 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 TCAF1Q9Y4C2 921 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 HES2Q9Y543 173 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 AQP9O43315 295 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 LRATO95237 230 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 MAP2K4P45985 399 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 PPP3CCP48454 512 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 POLR2JP52435 117 aaKnown RBP13.19□□□□□ -0.3
COL2A1-201ENST00000337299 SLC16A1P53985 500 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 TMBIM6P55061 237 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 CDK18Q07002 472 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 FAAH2Q6GMR7 532 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 PPP4R4Q6NUP7 873 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 PACRGLQ8N7B6 248 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 QKIQ96PU8 341 aaKnown RBP eCLIP13.19□□□□□ -0.3
COL2A1-201ENST00000337299 LHPPQ9H008 270 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 OR12D3Q9UGF7 316 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 POLR3HQ9Y535 204 aaPredicted RBP13.19□□□□□ -0.3
COL2A1-201ENST00000337299 C2CD4BA6NLJ0 364 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 CD3EAPO15446 510 aaKnown RBP13.19□□□□□ -0.3
COL2A1-201ENST00000337299 FARP2O94887 1054 aaPredicted RBP13.19□□□□□ -0.3
COL2A1-201ENST00000337299 KRT20P35900 424 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 TUBA1BP68363 451 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 COX10Q12887 443 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 GRM2Q14416 872 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 FAM214AQ32MH5 1076 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 ZNF280DQ6N043 979 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 TUBA1AQ71U36 451 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 DET1Q7L5Y6 550 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 PROSER1Q86XN7 944 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 MIB1Q86YT6 1006 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 GPRC5AQ8NFJ5 357 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 OR6J1Q8NGC5 347 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 LRRC58Q96CX6 371 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 DIRAS2Q96HU8 199 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 NPLQ9BXD5 320 aaPredicted RBP13.19□□□□□ -0.3
COL2A1-201ENST00000337299 TAS2R13Q9NYV9 303 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 UBIAD1Q9Y5Z9 338 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 CPQQ9Y646 472 aa13.19□□□□□ -0.3
COL2A1-201ENST00000337299 LAMA4Q16363 1823 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 TMX2-CTNND1H3BSU7 103 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 hCG_2039718K7EN88 272 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 RFPL2O75678 378 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 PTPRAP18433 802 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 TALDO1P37837 337 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 NCS1P62166 190 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 TP53BP2Q13625 1128 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 SKIV2LQ15477 1246 aaKnown RBP13.18□□□□□ -0.3
COL2A1-201ENST00000337299 WDR45BQ5MNZ6 344 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 INTS11Q5TA45 600 aaKnown RBP13.18□□□□□ -0.3
COL2A1-201ENST00000337299 CYP2U1Q7Z449 544 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 PIGZQ86VD9 579 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 CCDC28AQ8IWP9 274 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 PHC2Q8IXK0 858 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 ZFP90Q8TF47 636 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 MYDGFQ969H8 173 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 ROPN1LQ96C74 230 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 CCNB1IP1Q9NPC3 277 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 SNTG2Q9NY99 539 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 CCDC59Q9P031 241 aaKnown RBP13.18□□□□□ -0.3
COL2A1-201ENST00000337299 CNTN6Q9UQ52 1028 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 HSPB11Q9Y547 144 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 TLL2Q9Y6L7 1015 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 FAM47E-STBD1D6RA91 191 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 MYL12BO14950 172 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 CAPN15O75808 1086 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 HIST1H2AGP0C0S8 130 aaPredicted RBP13.18□□□□□ -0.3
COL2A1-201ENST00000337299 HIST1H2ADP20671 130 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 SLC15A1P46059 708 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 RGS4P49798 205 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 TBRG1Q3YBR2 411 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 RAB6CQ53S08 254 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 ERAP2Q6P179 960 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 TMPRSS11AQ6ZMR5 421 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 TMEM126BQ8IUX1 230 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 HIST1H2AHQ96KK5 128 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 HIST1H2AJQ99878 128 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 H2AFJQ9BTM1 129 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 ULBP1Q9BZM6 244 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 RAB6CQ9H0N0 254 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 LHX5Q9H2C1 402 aa13.18□□□□□ -0.3
COL2A1-201ENST00000337299 AKTIPQ9H8T0 292 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms