RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 KLHL20Q9Y2M5 609 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 PLLPQ9Y342 182 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 PRRC2BQ5JSZ5 2229 aaKnown RBP14.94□□□□□ -0.02
C9orf47-201ENST00000334490 ESR1P03372 595 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 HLA-DQB2P05538 268 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 HCAR3P49019 387 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 VN1R5Q7Z5H4 357 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 RPAINQ86UA6 219 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 ZC3H7AQ8IWR0 971 aaKnown RBP14.94□□□□□ -0.02
C9orf47-201ENST00000334490 TMEM40Q8WWA1 233 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 PANX1Q96RD7 426 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 TMEM209Q96SK2 561 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 XYLT2Q9H1B5 865 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 POLR3BQ9NW08 1133 aaPredicted RBP14.94□□□□□ -0.02
C9orf47-201ENST00000334490 ZNF711Q9Y462 761 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 CRHR1P34998 444 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 NSG1P42857 185 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 FBXO48Q5FWF7 155 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 LY6G5CQ5SRR4 150 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 GDPD4Q6W3E5 623 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 R3HCC1LQ7Z5L2 792 aaKnown RBP14.94□□□□□ -0.02
C9orf47-201ENST00000334490 OR2AP1Q8NGE2 309 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 FBXO30Q8TB52 745 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 LCN9Q8WX39 176 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 ZNF446Q9NWS9 450 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 TYRP14679 529 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 S100A5P33763 92 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 GSSP48637 474 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 TEAD4Q15561 434 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 MSANTD2Q6P1R3 559 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 C16orf62Q7Z3J2 963 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 SLC35B2Q8TB61 432 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 FANCEQ9HB96 536 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 EIF2B3Q9NR50 452 aaKnown RBP14.94□□□□□ -0.02
C9orf47-201ENST00000334490 NUP98P52948 1817 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 RGPD1P0DJD0 1748 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 J3KR12 359 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 TM4SF4P48230 202 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 UBXN11Q5T124 520 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 CPNE9Q8IYJ1 553 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 AHI1Q8N157 1196 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 IRF7Q92985 503 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 APOLD1Q96LR9 279 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 TSSK3Q96PN8 268 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 NPY6RQ99463 290 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 TRIT1Q9H3H1 467 aaKnown RBP14.93□□□□□ -0.02
C9orf47-201ENST00000334490 EBF3Q9H4W6 596 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 MIOSQ9NXC5 875 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 RECQL5O94762 991 aaPredicted RBP14.93□□□□□ -0.02
C9orf47-201ENST00000334490 NR2F1P10589 423 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 PTGIRP43119 386 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 HSPA7P48741 367 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 IL5RAQ01344 420 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 OGDHQ02218 1023 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 FSTL4Q6MZW2 842 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 GATAD2AQ86YP4 633 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 DSELQ8IZU8 1212 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 DCBLD1Q8N8Z6 715 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 PAAF1Q9BRP4 392 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 KLHL4Q9C0H6 718 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 ACSS2Q9NR19 701 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 CHD4Q14839 1912 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 TTC24A2A3L6 582 aaPredicted RBP14.93□□□□□ -0.02
C9orf47-201ENST00000334490 WNT9AO14904 365 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 CDH3P22223 829 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 SLC25A3Q00325 362 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 OR2AG1Q9H205 316 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 ARL5AQ9Y689 179 aa14.93□□□□□ -0.02
C9orf47-201ENST00000334490 FFAR2O15552 330 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 ANXA6P08133 673 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 NRLP54845 237 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 UBE3AQ05086 875 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 OR13C4Q8NGS5 318 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 AZIN2Q96A70 460 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 SAMD11Q96NU1 681 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 MCCC1Q96RQ3 725 aaPredicted RBP14.92□□□□□ -0.02
C9orf47-201ENST00000334490 IPPKQ9H8X2 491 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 FLRT1Q9NZU1 646 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 COPG2Q9UBF2 871 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 MTF2Q9Y483 593 aaPredicted RBP14.92□□□□□ -0.02
C9orf47-201ENST00000334490 ZNF780BQ9Y6R6 833 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 RGSL1A5PLK6 1076 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 GSNP06396 782 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 COX4I1P13073 169 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 UQCRBP14927 111 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 HOXA11P31270 313 aaPredicted RBP14.92□□□□□ -0.02
C9orf47-201ENST00000334490 CYP4Z2PQ8N1L4 340 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 C12orf76Q8N812 135 aaPredicted RBP14.92□□□□□ -0.02
C9orf47-201ENST00000334490 PPCDCQ96CD2 204 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 ZNF490Q9ULM2 529 aaPredicted RBP14.92□□□□□ -0.02
C9orf47-201ENST00000334490 CORO1CQ9ULV4 474 aaPredicted RBP14.92□□□□□ -0.02
C9orf47-201ENST00000334490 RHPN2P1A8MT19 583 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 LEFTY2O00292 366 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 SMNDC1O75940 238 aaKnown RBP eCLIP14.92□□□□□ -0.02
C9orf47-201ENST00000334490 RXRGP48443 463 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 GPAT3Q53EU6 434 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 MS4A13Q5J8X5 152 aa14.92□□□□□ -0.02
C9orf47-201ENST00000334490 KIAA0930Q6ICG6 404 aaPredicted RBP14.92□□□□□ -0.02
C9orf47-201ENST00000334490 CMTR2Q8IYT2 770 aaKnown RBP14.92□□□□□ -0.02
C9orf47-201ENST00000334490 OR52E6Q96RD3 313 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms