RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 ZNF384Q8TF68 577 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 FRS2Q8WU20 508 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 EXTL1Q92935 676 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 TMEM143Q96AN5 459 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 SPANXDQ9BXN6 97 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZDHHC5Q9C0B5 715 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 KCNN2Q9H2S1 579 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 FN3KRPQ9HA64 309 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 SMPD4Q9NXE4 827 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 KCMF1Q9P0J7 381 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 IGSF9Q9P2J2 1179 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF232Q9UNY5 417 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 JAG2Q9Y219 1238 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 C17orf113A0A1B0GUU1 675 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ATP6AP2A0A1C7CYW4 349 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 LRRC53A6NM62 1247 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ATP6AP2O75787 350 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 PSMA1P25786 263 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 GLRBP48167 497 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC7A5Q01650 507 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 VPS26BQ4G0F5 336 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 SEL1L3Q68CR1 1132 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 COL23A1Q86Y22 540 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 COLGALT1Q8NBJ5 622 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 COQ8BQ96D53 544 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 GMCL1Q96IK5 515 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 CMTM3Q96MX0 182 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ELP3Q9H9T3 547 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 MAN2C1Q9NTJ4 1040 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ABCC12Q96J65 1359 aa6.05□□□□□ -1.44
CDC42BPA-201ENST00000334218 ARGFXA6NJG6 315 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 VSTM5A8MXK1 200 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 GLUD1P00367 558 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 TAF6P49848 677 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 ERVK-8P63133 956 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 EMC10Q5UCC4 262 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 BTBD8Q5XKL5 378 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 CYP2R1Q6VVX0 501 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 USP30Q70CQ3 517 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZDHHC13Q8IUH4 622 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 CNTD1Q8N815 330 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 ELMO3Q96BJ8 720 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 CDKN2AIPNLQ96HQ2 116 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 MGME1Q9BQP7 344 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 ULBP3Q9BZM4 244 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 C6orf50Q9HD87 102 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 PLCXD1Q9NUJ7 323 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 PALD1Q9ULE6 856 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 YLPM1P49750 1951 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 NUP205Q92621 2012 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 SPDYE3A6NKU9 549 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 A6NL46 340 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 CACNB4O00305 520 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 CLIC2O15247 247 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 DYRK3O43781 588 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 AKR1B1P15121 316 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 FASLGP48023 281 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 CRY1Q16526 586 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 NDUFA9Q16795 377 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 CNPY1Q3B7I2 92 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 SV2CQ496J9 727 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 MPPE1Q53F39 396 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 XKR5Q6UX68 686 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 SEMA4DQ92854 862 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 KDM3AQ9Y4C1 1321 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 CYTIPO60759 359 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 PROS1P07225 676 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 DCNP07585 359 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 PLA2G4BP0C869 781 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 NUDT2P50583 147 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 ERVK-25P63136 954 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 C21orf62-AS1Q17RA5 79 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 OR6Y1Q8NGX8 325 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 THAP6Q8TBB0 222 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 LRRC58Q96CX6 371 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 C11orf24Q96F05 449 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 ERVK-6Q9BXR3 956 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 ERVK-18Q9QC07 812 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 TESMINQ9Y4I5 508 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 DCCP43146 1447 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 CABIN1Q9Y6J0 2220 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 PLXNC1O60486 1568 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 CASKO14936 926 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 CCNB2O95067 398 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 H2AFZP0C0S5 128 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 CYP11B1P15538 503 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF10P21506 573 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 PSMB9P28065 219 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 ETV6P41212 452 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 BNIP2Q12982 314 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 PARP6Q2NL67 630 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 H2AFVQ71UI9 128 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 ACOT1Q86TX2 421 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 NRROSQ86YC3 692 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 APCDD1Q8J025 514 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 JPH3Q8WXH2 748 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 PINX1Q96BK5 328 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 TESK2Q96S53 571 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 MED18Q9BUE0 208 aa6.04□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM120CQ9NX05 1096 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms