RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 MAGEB16A2A368 324 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 FAM72CH0Y354 149 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 TNFRSF10BO14763 440 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 SNAP91O60641 907 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 DLGAP3O95886 979 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 F11P03951 625 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 DMC1Q14565 340 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 ZIK1Q3SY52 487 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-201ENST00000334136 FAM72AQ5TYM5 149 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 FAM72DQ6L9T8 149 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 TRMT10BQ6PF06 316 aaKnown RBP11.76□□□□□ -0.53
HDAC6-201ENST00000334136 STK32CQ86UX6 486 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 FAM72BQ86X60 149 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 VN1R2Q8NFZ6 395 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 SHDQ96IW2 340 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 MYRFLQ96LU7 910 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 NPAS2Q99743 824 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 ASPSCR1Q9BZE9 553 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 COLQQ9Y215 455 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-201ENST00000334136 HDAC3O15379 428 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 UGT1A9O60656 530 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 KLF10Q13118 480 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 GRTP1Q5TC63 336 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 GPR107Q5VW38 600 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 NCBP2-AS2Q69YL0 99 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 ZNF470Q6ECI4 717 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 TRMT11Q7Z4G4 463 aaKnown RBP11.76□□□□□ -0.53
HDAC6-201ENST00000334136 MIER2Q8N344 545 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 FAM47BQ8NA70 645 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 MAGEE2Q8TD90 523 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-201ENST00000334136 FAM162AQ96A26 154 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 CERS2Q96G23 380 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 RNF145Q96MT1 663 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 LENG8Q96PV6 779 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-201ENST00000334136 CIB1Q99828 191 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 ACE2Q9BYF1 805 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-201ENST00000334136 LINC00597Q9H2U6 94 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 POLR1BQ9H9Y6 1135 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 UGT1A7Q9HAW7 530 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 UGT1A10Q9HAW8 530 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 UGT1A8Q9HAW9 530 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 VPS45Q9NRW7 570 aa11.76□□□□□ -0.53
HDAC6-201ENST00000334136 TCRBV7S3A2A0A539 114 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 ALDH1A2O94788 518 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 PIRTP0C851 137 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 HNRNPLP14866 589 aaKnown RBP eCLIP11.75□□□□□ -0.53
HDAC6-201ENST00000334136 GRIA4P48058 902 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 RUNX3Q13761 415 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 GRM3Q14832 879 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 DHCR24Q15392 516 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 PERM1Q5SV97 790 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 PIK3R6Q5UE93 754 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 CD300LGQ6UXG3 332 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 GPR149Q86SP6 731 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 TDRPQ86YL5 185 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 IGSF8Q969P0 613 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 PGAP3Q96FM1 320 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-201ENST00000334136 CD274Q9NZQ7 290 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 POP4O95707 220 aaKnown RBP11.75□□□□□ -0.53
HDAC6-201ENST00000334136 LATS1O95835 1130 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 PIK3R1P27986 724 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 TIE1P35590 1138 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 CHRNB3Q05901 458 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 TMEM25Q86YD3 366 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 CCDC103Q8IW40 242 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 AHI1Q8N157 1196 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 DHRSXQ8N5I4 330 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 CPNE1Q99829 537 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 SPATA16Q9BXB7 569 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 RSL24D1Q9UHA3 163 aaKnown RBP11.75□□□□□ -0.53
HDAC6-201ENST00000334136 PSMD13Q9UNM6 376 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 KNL1Q8NG31 2342 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 HHLA1C9JL84 531 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 PSMD12O00232 456 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-201ENST00000334136 PRNPP04156 253 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 HMGA1P17096 107 aaKnown RBP11.75□□□□□ -0.53
HDAC6-201ENST00000334136 ABL2P42684 1182 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 PSME3P61289 254 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 DSC2Q02487 901 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 ZNF252P-AS1Q0IIN9 211 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 AARS2Q5JTZ9 985 aaKnown RBP11.75□□□□□ -0.53
HDAC6-201ENST00000334136 CYB5D2Q8WUJ1 264 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 TMEM248Q9NWD8 314 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 EGFL7Q9UHF1 273 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 VPS9D1Q9Y2B5 631 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 BUD23O43709 281 aaKnown RBP11.75□□□□□ -0.53
HDAC6-201ENST00000334136 TGDSO95455 350 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 CTPS1P17812 591 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 S100A5P33763 92 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 ACTR3P61158 418 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 SCAPQ12770 1279 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 PACS1Q6VY07 963 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 FAM124AQ86V42 546 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 ZCCHC7Q8N3Z6 543 aaKnown RBP11.75□□□□□ -0.53
HDAC6-201ENST00000334136 KLF16Q9BXK1 252 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-201ENST00000334136 CASS4Q9NQ75 786 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 SNX15Q9NRS6 342 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 MRGBPQ9NV56 204 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 TMEM30AQ9NV96 361 aa11.75□□□□□ -0.53
HDAC6-201ENST00000334136 POMPQ9Y244 141 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms