RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 PRSS21Q9Y6M0 314 aa16.41■□□□□ 0.22
SHOX-201ENST00000334060 MAP2K7O14733 419 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 LATO43561 262 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 RPS21P63220 83 aaKnown RBP16.4■□□□□ 0.22
SHOX-201ENST00000334060 B4GALNT1Q00973 533 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 LONRF1Q17RB8 773 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 SKIDA1Q1XH10 827 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 SPANXN3Q5MJ09 141 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 TEDDM1Q5T9Z0 273 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 KIAA0895LQ68EN5 471 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 RAET1GQ6H3X3 334 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 EMBQ6PCB8 327 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 FAM136AQ96C01 138 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 BMFQ96LC9 184 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 SLC6A18Q96N87 628 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 FOXP3Q9BZS1 431 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 ASB8Q9H765 288 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 PKD2L2Q9NZM6 624 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 R4GN57 208 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 CACNA1HO95180 2353 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 CEP192Q8TEP8 1941 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 SMIM23A6NLE4 172 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 ZNF217O75362 1048 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 SASH3O75995 380 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 FUCA1P04066 466 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 SLCO1A2P46721 670 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 POLD2P49005 469 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 CREB5Q02930 508 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 NFATC2Q13469 925 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 SLMAPQ14BN4 828 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 DBN1Q16643 649 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 GCNT7Q6ZNI0 430 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 HDXQ7Z353 690 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 OR4L1Q8NH43 312 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 EPS8L3Q8TE67 593 aaKnown RBP16.4■□□□□ 0.22
SHOX-201ENST00000334060 LRFN3Q9BTN0 628 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 PHACTR1Q9C0D0 580 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 FSCN3Q9NQT6 498 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 TMEM74BQ9NUR3 256 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 TMEM98Q9Y2Y6 226 aa16.4■□□□□ 0.22
SHOX-201ENST00000334060 PLXND1Q9Y4D7 1925 aa16.39■□□□□ 0.21
SHOX-201ENST00000334060 THADAQ6YHU6 1953 aa16.39■□□□□ 0.21
SHOX-201ENST00000334060 LRRC72A6NJI9 287 aa16.39■□□□□ 0.21
SHOX-201ENST00000334060 H7C0S8 307 aa16.39■□□□□ 0.21
SHOX-201ENST00000334060 HAUS5O94927 633 aa16.39■□□□□ 0.21
SHOX-201ENST00000334060 WNT1P04628 370 aa16.39■□□□□ 0.21
SHOX-201ENST00000334060 NEPROQ6NW34 567 aa16.39■□□□□ 0.21
SHOX-201ENST00000334060 CNSTQ6PJW8 725 aa16.39■□□□□ 0.21
SHOX-201ENST00000334060 NAPRTQ6XQN6 538 aa16.39■□□□□ 0.21
SHOX-201ENST00000334060 DET1Q7L5Y6 550 aa16.39■□□□□ 0.21
SHOX-201ENST00000334060 TAS2R42Q7RTR8 314 aa16.39■□□□□ 0.21
SHOX-201ENST00000334060 WDR5BQ86VZ2 330 aa16.39■□□□□ 0.21
SHOX-201ENST00000334060 TRIM69Q86WT6 500 aa16.39■□□□□ 0.21
SHOX-201ENST00000334060 CLDN19Q8N6F1 224 aa16.39■□□□□ 0.21
SHOX-201ENST00000334060 FUT8Q9BYC5 575 aa16.39■□□□□ 0.21
SHOX-201ENST00000334060 PRKAB1Q9Y478 270 aa16.39■□□□□ 0.21
SHOX-201ENST00000334060 FAM159BA6NKW6 160 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 IQCF5A8MTL0 148 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 AP3B1O00203 1094 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 NDC80O14777 642 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 ITPKAP23677 461 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 LRRC14Q15048 493 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 USP39Q53GS9 565 aaKnown RBP16.38■□□□□ 0.21
SHOX-201ENST00000334060 KIAA1161Q6NSJ0 714 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 DOK6Q6PKX4 331 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 LONP2Q86WA8 852 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 SERPINA9Q86WD7 417 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 HEATR4Q86WZ0 1026 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 OTUD6BQ8N6M0 293 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 PPM1NQ8N819 430 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 ZNF398Q8TD17 642 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 MYCBPQ99417 103 aaPredicted RBP16.38■□□□□ 0.21
SHOX-201ENST00000334060 IER2Q9BTL4 223 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 MRPL40Q9NQ50 206 aaKnown RBP16.38■□□□□ 0.21
SHOX-201ENST00000334060 CRYL1Q9Y2S2 319 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 NFS1Q9Y697 457 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 MAGEB16A2A368 324 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 PRR33A8MZF0 331 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 POC1B-GALNT4F8VUJ3 575 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 PSMD11O00231 422 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 CD3EAPO15446 510 aaKnown RBP16.38■□□□□ 0.21
SHOX-201ENST00000334060 SUOXP51687 545 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 SGCGQ13326 291 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 BMPR2Q13873 1038 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 RBM20Q5T481 1227 aaKnown RBP16.38■□□□□ 0.21
SHOX-201ENST00000334060 GPRC6AQ5T6X5 926 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 PNCKQ6P2M8 343 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 CYP2U1Q7Z449 544 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 CTAGE3PQ8IX95 158 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 SLC22A18ASQ8N1D0 253 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 BEND7Q8N7W2 519 aaPredicted RBP16.38■□□□□ 0.21
SHOX-201ENST00000334060 TMEM145Q8NBT3 493 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 LKAAEAR1Q8TD35 194 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 NELL1Q92832 810 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 PLEKHG4BQ96PX9 1271 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 NDNQ99608 321 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 MIR1-1HGQ9H1L0 117 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 DUSP15Q9H1R2 295 aaPredicted RBP16.38■□□□□ 0.21
SHOX-201ENST00000334060 CATSPERZQ9NTU4 200 aa16.38■□□□□ 0.21
SHOX-201ENST00000334060 GALPQ9UBC7 116 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms