RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 ZW10O43264 779 aa11.83□□□□□ -0.52
LIMK2-202ENST00000333611 INHBBP09529 407 aa11.83□□□□□ -0.52
LIMK2-202ENST00000333611 MYL4P12829 197 aa11.83□□□□□ -0.52
LIMK2-202ENST00000333611 S100A5P33763 92 aa11.83□□□□□ -0.52
LIMK2-202ENST00000333611 FASTKQ14296 549 aaKnown RBP11.83□□□□□ -0.52
LIMK2-202ENST00000333611 MEP1AQ16819 746 aa11.83□□□□□ -0.52
LIMK2-202ENST00000333611 CELF3Q5SZQ8 465 aaKnown RBP11.83□□□□□ -0.52
LIMK2-202ENST00000333611 FAM205BPQ63HN1 556 aa11.83□□□□□ -0.52
LIMK2-202ENST00000333611 HMBOX1Q6NT76 420 aa11.83□□□□□ -0.52
LIMK2-202ENST00000333611 HFE2Q6ZVN8 426 aa11.83□□□□□ -0.52
LIMK2-202ENST00000333611 EFL1Q7Z2Z2 1120 aaKnown RBP11.83□□□□□ -0.52
LIMK2-202ENST00000333611 AMIGO1Q86WK6 493 aa11.83□□□□□ -0.52
LIMK2-202ENST00000333611 TICAM1Q8IUC6 712 aa11.83□□□□□ -0.52
LIMK2-202ENST00000333611 S100ZQ8WXG8 99 aa11.83□□□□□ -0.52
LIMK2-202ENST00000333611 MSANTD3Q96H12 275 aa11.83□□□□□ -0.52
LIMK2-202ENST00000333611 CSF3RQ99062 836 aa11.83□□□□□ -0.52
LIMK2-202ENST00000333611 FTHL17Q9BXU8 183 aa11.83□□□□□ -0.52
LIMK2-202ENST00000333611 ASPSCR1Q9BZE9 553 aa11.83□□□□□ -0.52
LIMK2-202ENST00000333611 ASB7Q9H672 318 aa11.83□□□□□ -0.52
LIMK2-202ENST00000333611 DUS2Q9NX74 493 aaKnown RBP11.83□□□□□ -0.52
LIMK2-202ENST00000333611 VPS4AQ9UN37 437 aa11.83□□□□□ -0.52
LIMK2-202ENST00000333611 DNMT3AQ9Y6K1 912 aaPredicted RBP11.83□□□□□ -0.52
LIMK2-202ENST00000333611 IGKV6D-21A0A0A0MT36 114 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 G3V2L1 256 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 ARHGEF15O94989 841 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 ACADSBP45954 432 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 RHDQ02161 417 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 CCDC85BQ15834 202 aaPredicted RBP11.82□□□□□ -0.52
LIMK2-202ENST00000333611 NFE2Q16621 373 aaPredicted RBP11.82□□□□□ -0.52
LIMK2-202ENST00000333611 TBRG1Q3YBR2 411 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 CDONQ4KMG0 1287 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 CATSPEREQ5SY80 951 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 FSTL5Q8N475 847 aaPredicted RBP11.82□□□□□ -0.52
LIMK2-202ENST00000333611 FEM1AQ9BSK4 669 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 C9orf16Q9BUW7 83 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 ELP3Q9H9T3 547 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 CDH7Q9ULB5 785 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.82□□□□□ -0.52
LIMK2-202ENST00000333611 BTBD3Q9Y2F9 522 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 NME7Q9Y5B8 376 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 MAGED1Q9Y5V3 778 aaPredicted RBP11.82□□□□□ -0.52
LIMK2-202ENST00000333611 AP3D1O14617 1153 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 ONECUT3O60422 494 aaPredicted RBP11.82□□□□□ -0.52
LIMK2-202ENST00000333611 KRT6AP02538 564 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 KRT6BP04259 564 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 PTPN2P17706 415 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 ATP6V1B2P21281 511 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 CBLP22681 906 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 ETV3P41162 512 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 RPS9P46781 194 aaKnown RBP11.82□□□□□ -0.52
LIMK2-202ENST00000333611 BST2Q10589 180 aaKnown RBP11.82□□□□□ -0.52
LIMK2-202ENST00000333611 ILF2Q12905 390 aaKnown RBP11.82□□□□□ -0.52
LIMK2-202ENST00000333611 AASDHQ4L235 1098 aaPredicted RBP11.82□□□□□ -0.52
LIMK2-202ENST00000333611 NHSL2Q5HYW2 709 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 SPANXN3Q5MJ09 141 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 ATAD3CQ5T2N8 411 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 NT5DC4Q86YG4 428 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 TTC30BQ8N4P2 665 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 NPLOC4Q8TAT6 608 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 AFG1LQ8WV93 481 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 RORBQ92753 470 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 HDAC10Q969S8 669 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 COPS4Q9BT78 406 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 NDFIP2Q9NV92 336 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 DDIT4Q9NX09 232 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 SMPD3Q9NY59 655 aaPredicted RBP11.82□□□□□ -0.52
LIMK2-202ENST00000333611 ERAP1Q9NZ08 941 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 WBP11Q9Y2W2 641 aaKnown RBP11.82□□□□□ -0.52
LIMK2-202ENST00000333611 RAP2CQ9Y3L5 183 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 COPG1Q9Y678 874 aaKnown RBP11.82□□□□□ -0.52
LIMK2-202ENST00000333611 DNAH12Q6ZR08 3092 aa11.82□□□□□ -0.52
LIMK2-202ENST00000333611 PRR23AA6NEV1 266 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 MT-CYBP00156 380 aaPredicted RBP11.81□□□□□ -0.52
LIMK2-202ENST00000333611 ATP5BP06576 529 aaKnown RBP11.81□□□□□ -0.52
LIMK2-202ENST00000333611 ENPP1P22413 925 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 PROZP22891 400 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 IL12RB1P42701 662 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 DEFA1P59665 94 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 DEFA3P59666 94 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 IL5RAQ01344 420 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 IGSF11Q5DX21 431 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 HORMAD1Q86X24 394 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 ST8SIA2Q92186 375 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 ZHX1-C8orf76Q96EF9 292 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 OSMRQ99650 979 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 TDRD1Q9BXT4 1180 aaKnown RBP11.81□□□□□ -0.52
LIMK2-202ENST00000333611 OR2B2Q9GZK3 357 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 NXF3Q9H4D5 531 aaKnown RBP11.81□□□□□ -0.52
LIMK2-202ENST00000333611 SLC35C2Q9NQQ7 365 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 C16orf96A6NNT2 1141 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 CCL22O00626 93 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 NOBOXO60393 691 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 CD40LGP29965 261 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 CAPGP40121 348 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 BCAT1P54687 386 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 ITKQ08881 620 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 SYT16Q17RD7 645 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 PSTKQ8IV42 348 aaKnown RBP11.81□□□□□ -0.52
LIMK2-202ENST00000333611 DNAJB14Q8TBM8 379 aa11.81□□□□□ -0.52
LIMK2-202ENST00000333611 TRPM4Q8TD43 1214 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms