RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 A0A0D9SEW6 157 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 DRGXA6NNA5 263 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 H3BMM5 538 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ECI2O75521 394 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 CAPN3P20807 821 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 TTPAP49638 278 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 NAA20P61599 178 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 TXNL4AP83876 142 aaKnown RBP11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ZNF177Q13360 481 aaPredicted RBP11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 UGT3A2Q3SY77 523 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 KANK2Q63ZY3 851 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ZNF598Q86UK7 904 aaKnown RBP11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 CHERPQ8IWX8 916 aaKnown RBP11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 MINDY1Q8N5J2 469 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 METTL25Q8N6Q8 603 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 B3GALT6Q96L58 329 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ATOH8Q96SQ7 321 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ADGRE3Q9BY15 652 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 SDR39U1Q9NRG7 319 aaPredicted RBP11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 CCM2LQ9NUG4 571 aaPredicted RBP11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 RSL24D1Q9UHA3 163 aaKnown RBP11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 TSR3Q9UJK0 312 aaKnown RBP11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 NPEPPSL1A6NEC2 478 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 VILLO15195 856 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 SLC22A3O75751 556 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 RHOCP08134 193 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 LPOP22079 712 aaPredicted RBP11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ATP5C1P36542 298 aaKnown RBP11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 DIO3P55073 304 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ECT2LQ008S8 904 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 TWF1Q12792 350 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 DUSP4Q13115 394 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 BTG3Q14201 252 aaPredicted RBP11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 TXNDC11Q6PKC3 985 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ZNF683Q8IZ20 524 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 TNIP2Q8NFZ5 429 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 VPS33AQ96AX1 596 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 MUC3BQ9H195 1237 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ALG2Q9H553 416 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ARMC1Q9NVT9 282 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ACTR3BQ9P1U1 418 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 SLC8A2Q9UPR5 921 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ARIH1Q9Y4X5 557 aaPredicted RBP11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 SQORQ9Y6N5 450 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 V9GYQ6 96 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 H3BSA7 217 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 CDC7O00311 574 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 MUSKO15146 869 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 SYNCRIPO60506 623 aaKnown RBP11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ALDH2P05091 517 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 PRSS56P0CW18 603 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 BMP2P12643 396 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 KCNQ1P51787 676 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 INHBEP58166 350 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ACVR1Q04771 509 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 RING1Q06587 406 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 CRHR2Q13324 411 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 SEMA3AQ14563 771 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ATP6AP1LQ52LC2 224 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 AARS2Q5JTZ9 985 aaKnown RBP11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 FAM219BQ5XKK7 198 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 PPP4R4Q6NUP7 873 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ANKFN1Q8N957 763 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 SH3RF2Q8TEC5 729 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 SLCO4A1Q96BD0 722 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 GLT1D1Q96MS3 346 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 C1orf50Q9BV19 199 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 TRIM54Q9BYV2 358 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 LEF1Q9UJU2 399 aaPredicted RBP11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 DNMT3LQ9UJW3 386 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 LRFN2Q9ULH4 789 aa11.63□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 SCN4AP35499 1836 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 A0A087WXM4 84 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 INSIG1O15503 277 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 TRMUO75648 421 aaKnown RBP11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 MATN4O95460 622 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 UROSP10746 265 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 MTHFD2P13995 350 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 PKMP14618 531 aaKnown RBP11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ZNF23P17027 643 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 IHHQ14623 411 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 TIGD2Q4W5G0 525 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 RNF180Q86T96 592 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 RASAL3Q86YV0 1011 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 CDYL2Q8N8U2 506 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 CENPNQ96H22 339 aaPredicted RBP11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 LRCH3Q96II8 777 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 PIF1Q9H611 641 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 NLE1Q9NVX2 485 aaPredicted RBP11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 MAP10Q9P2G4 905 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 A0A1B0GVG6 124 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 A0A1W2PP18 115 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 PDLIM1O00151 329 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 ASLP04424 464 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 GPIP06744 558 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 HSD17B1P14061 328 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 MC4RP32245 332 aa11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 TAF1AQ15573 450 aaPredicted RBP11.62□□□□□ -0.55
CSPG4P4Y-201ENST00000333235 PABPC1LQ4VXU2 614 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms